Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
MT-ND3P03897 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.13■□□□□ 0.17
MT-ND3P03897 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.13■□□□□ 0.17
MT-ND3P03897 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.13■□□□□ 0.17
MT-ND3P03897 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.13■□□□□ 0.17
MT-ND3P03897 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.13■□□□□ 0.17
MT-ND3P03897 CYMP-203ENST00000474680 1263 ntBASIC16.13■□□□□ 0.17
MT-ND3P03897 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
MT-ND3P03897 AL513210.1-201ENST00000629608 234 ntBASIC16.13■□□□□ 0.17
MT-ND3P03897 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 AL009178.2-201ENST00000597278 2719 ntBASIC16.13■□□□□ 0.17
MT-ND3P03897 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MT-ND3P03897 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MT-ND3P03897 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
MT-ND3P03897 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND3P03897 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND3P03897 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND3P03897 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND3P03897 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
MT-ND3P03897 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.12■□□□□ 0.17
MT-ND3P03897 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.12■□□□□ 0.17
MT-ND3P03897 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 TSEN15P1-201ENST00000423257 515 ntBASIC16.12■□□□□ 0.17
MT-ND3P03897 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.12■□□□□ 0.17
MT-ND3P03897 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.12■□□□□ 0.17
MT-ND3P03897 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND3P03897 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.12■□□□□ 0.17
MT-ND3P03897 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
MT-ND3P03897 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.12■□□□□ 0.17
MT-ND3P03897 MIR4321-201ENST00000592276 80 ntBASIC16.12■□□□□ 0.17
MT-ND3P03897 AC105339.1-204ENST00000636249 355 ntBASIC16.12■□□□□ 0.17
MT-ND3P03897 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.12■□□□□ 0.17
MT-ND3P03897 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
MT-ND3P03897 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 AC134407.2-201ENST00000625089 1978 ntBASIC16.12■□□□□ 0.17
MT-ND3P03897 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
MT-ND3P03897 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 CICP24-201ENST00000605464 2705 ntBASIC16.12■□□□□ 0.17
MT-ND3P03897 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.12■□□□□ 0.17
MT-ND3P03897 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MT-ND3P03897 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
MT-ND3P03897 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MT-ND3P03897 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.12■□□□□ 0.17
MT-ND3P03897 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MT-ND3P03897 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.11■□□□□ 0.17
MT-ND3P03897 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
MT-ND3P03897 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
MT-ND3P03897 AC112693.3-201ENST00000624819 1983 ntBASIC16.11■□□□□ 0.17
MT-ND3P03897 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.11■□□□□ 0.17
MT-ND3P03897 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.11■□□□□ 0.17
MT-ND3P03897 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MT-ND3P03897 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.11■□□□□ 0.17
MT-ND3P03897 AL589702.1-201ENST00000641229 1509 ntBASIC16.11■□□□□ 0.17
MT-ND3P03897 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MT-ND3P03897 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms