Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.29■□□□□ 0.36
CD4P01730 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.29■□□□□ 0.36
CD4P01730 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 AC107373.2-201ENST00000607735 490 ntBASIC17.29■□□□□ 0.36
CD4P01730 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.29■□□□□ 0.36
CD4P01730 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.29■□□□□ 0.36
CD4P01730 AL008638.5-201ENST00000623814 1298 ntBASIC17.29■□□□□ 0.36
CD4P01730 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.29■□□□□ 0.36
CD4P01730 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CD4P01730 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.29■□□□□ 0.36
CD4P01730 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD4P01730 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.29■□□□□ 0.36
CD4P01730 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.29■□□□□ 0.36
CD4P01730 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CD4P01730 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.28■□□□□ 0.36
CD4P01730 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.28■□□□□ 0.36
CD4P01730 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.28■□□□□ 0.36
CD4P01730 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CD4P01730 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.28■□□□□ 0.36
CD4P01730 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.28■□□□□ 0.36
CD4P01730 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.28■□□□□ 0.36
CD4P01730 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.28■□□□□ 0.36
CD4P01730 AC007969.1-201ENST00000433675 447 ntBASIC17.28■□□□□ 0.36
CD4P01730 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 IGHJ2P-201ENST00000454480 60 ntBASIC17.28■□□□□ 0.36
CD4P01730 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.28■□□□□ 0.36
CD4P01730 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CD4P01730 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CD4P01730 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.28■□□□□ 0.36
CD4P01730 AC015910.1-201ENST00000579400 975 ntBASIC17.28■□□□□ 0.36
CD4P01730 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.28■□□□□ 0.36
CD4P01730 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.28■□□□□ 0.36
CD4P01730 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.28■□□□□ 0.36
CD4P01730 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
CD4P01730 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CD4P01730 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.28■□□□□ 0.36
CD4P01730 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD4P01730 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD4P01730 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CD4P01730 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CD4P01730 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CD4P01730 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD4P01730 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD4P01730 AL138709.1-201ENST00000614840 1693 ntBASIC17.27■□□□□ 0.36
CD4P01730 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CD4P01730 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD4P01730 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.27■□□□□ 0.36
CD4P01730 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD4P01730 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD4P01730 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.27■□□□□ 0.36
CD4P01730 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD4P01730 BTBD6P1-201ENST00000412176 1267 ntBASIC17.27■□□□□ 0.36
CD4P01730 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.27■□□□□ 0.36
CD4P01730 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.27■□□□□ 0.36
CD4P01730 AP001582.1-201ENST00000525856 295 ntBASIC17.27■□□□□ 0.36
CD4P01730 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.27■□□□□ 0.36
CD4P01730 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.27■□□□□ 0.36
CD4P01730 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.27■□□□□ 0.36
CD4P01730 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.27■□□□□ 0.36
CD4P01730 AL021578.1-201ENST00000613646 709 ntBASIC17.27■□□□□ 0.36
CD4P01730 AP005019.2-201ENST00000615104 511 ntBASIC17.27■□□□□ 0.36
CD4P01730 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.27■□□□□ 0.36
CD4P01730 AC132938.4-201ENST00000623835 848 ntBASIC17.27■□□□□ 0.36
CD4P01730 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CD4P01730 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD4P01730 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD4P01730 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD4P01730 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.27■□□□□ 0.35
CD4P01730 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD4P01730 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CD4P01730 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.27■□□□□ 0.35
CD4P01730 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
CD4P01730 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.27■□□□□ 0.35
CD4P01730 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CD4P01730 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CD4P01730 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.26■□□□□ 0.35
CD4P01730 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CD4P01730 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CD4P01730 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms