Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH8O95206 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH8O95206 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH8O95206 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH8O95206 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH8O95206 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDH8O95206 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDH8O95206 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH8O95206 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH8O95206 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
PCDH8O95206 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH8O95206 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
PCDH8O95206 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDH8O95206 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH8O95206 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDH8O95206 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH8O95206 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDH8O95206 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDH8O95206 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDH8O95206 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH8O95206 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PCDH8O95206 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PCDH8O95206 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PCDH8O95206 AC134915.1-201ENST00000426461 574 ntBASIC15.71■□□□□ 0.11
PCDH8O95206 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDH8O95206 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDH8O95206 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDH8O95206 IGHV3-71-201ENST00000523324 359 ntBASIC15.71■□□□□ 0.11
PCDH8O95206 KRT17P8-201ENST00000540749 863 ntBASIC15.71■□□□□ 0.11
PCDH8O95206 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH8O95206 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH8O95206 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDH8O95206 AL359881.2-201ENST00000602973 570 ntBASIC15.71■□□□□ 0.11
PCDH8O95206 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH8O95206 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH8O95206 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 CU634019.7-201ENST00000624153 1185 ntBASIC15.71■□□□□ 0.11
PCDH8O95206 FP236241.2-201ENST00000624906 1185 ntBASIC15.71■□□□□ 0.11
PCDH8O95206 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
PCDH8O95206 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH8O95206 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.71■□□□□ 0.11
PCDH8O95206 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
PCDH8O95206 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDH8O95206 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDH8O95206 AC063926.3-201ENST00000624734 5658 ntBASIC15.71■□□□□ 0.1
PCDH8O95206 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.71■□□□□ 0.1
PCDH8O95206 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDH8O95206 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDH8O95206 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH8O95206 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH8O95206 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCDH8O95206 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH8O95206 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH8O95206 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH8O95206 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH8O95206 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH8O95206 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PCDH8O95206 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH8O95206 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDH8O95206 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH8O95206 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PCDH8O95206 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH8O95206 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDH8O95206 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH8O95206 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH8O95206 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH8O95206 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH8O95206 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH8O95206 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PCDH8O95206 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH8O95206 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDH8O95206 AL162726.2-201ENST00000438986 1017 ntBASIC15.7■□□□□ 0.1
PCDH8O95206 RPL13AP25-201ENST00000484130 612 ntBASIC15.7■□□□□ 0.1
PCDH8O95206 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH8O95206 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDH8O95206 RAB43P1-201ENST00000561790 589 ntBASIC15.7■□□□□ 0.1
PCDH8O95206 AL359711.2-201ENST00000563105 872 ntBASIC15.7■□□□□ 0.1
PCDH8O95206 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH8O95206 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PCDH8O95206 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDH8O95206 AC010319.3-201ENST00000597028 470 ntBASIC15.7■□□□□ 0.1
PCDH8O95206 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDH8O95206 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDH8O95206 AL162274.1-201ENST00000617191 1098 ntBASIC15.7■□□□□ 0.1
PCDH8O95206 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
PCDH8O95206 AC069224.1-201ENST00000566372 1715 ntBASIC15.7■□□□□ 0.1
PCDH8O95206 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms