Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDRT1O95170 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.13□□□□□ -0.15
CDRT1O95170 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDRT1O95170 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.13□□□□□ -0.15
CDRT1O95170 MIR1224-201ENST00000408193 85 ntBASIC14.13□□□□□ -0.15
CDRT1O95170 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.13□□□□□ -0.15
CDRT1O95170 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.13□□□□□ -0.15
CDRT1O95170 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CDRT1O95170 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.13□□□□□ -0.15
CDRT1O95170 RPS2P1-201ENST00000434010 821 ntBASIC14.13□□□□□ -0.15
CDRT1O95170 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.13□□□□□ -0.15
CDRT1O95170 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.13□□□□□ -0.15
CDRT1O95170 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.13□□□□□ -0.15
CDRT1O95170 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.13□□□□□ -0.15
CDRT1O95170 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.13□□□□□ -0.15
CDRT1O95170 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.13□□□□□ -0.15
CDRT1O95170 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.13□□□□□ -0.15
CDRT1O95170 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
CDRT1O95170 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.13□□□□□ -0.15
CDRT1O95170 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.13□□□□□ -0.15
CDRT1O95170 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.13□□□□□ -0.15
CDRT1O95170 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.13□□□□□ -0.15
CDRT1O95170 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CDRT1O95170 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CDRT1O95170 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.13□□□□□ -0.15
CDRT1O95170 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDRT1O95170 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
CDRT1O95170 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDRT1O95170 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.12□□□□□ -0.15
CDRT1O95170 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDRT1O95170 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.12□□□□□ -0.15
CDRT1O95170 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.12□□□□□ -0.15
CDRT1O95170 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.12□□□□□ -0.15
CDRT1O95170 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDRT1O95170 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDRT1O95170 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.12□□□□□ -0.15
CDRT1O95170 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 DUSP5P1-201ENST00000441325 1139 ntBASIC14.12□□□□□ -0.15
CDRT1O95170 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.12□□□□□ -0.15
CDRT1O95170 OR7E14P-202ENST00000530490 1290 ntBASIC14.12□□□□□ -0.15
CDRT1O95170 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.12□□□□□ -0.15
CDRT1O95170 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.12□□□□□ -0.15
CDRT1O95170 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.12□□□□□ -0.15
CDRT1O95170 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.12□□□□□ -0.15
CDRT1O95170 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDRT1O95170 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.12□□□□□ -0.15
CDRT1O95170 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDRT1O95170 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 AC023024.2-201ENST00000623561 1993 ntBASIC14.12□□□□□ -0.15
CDRT1O95170 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDRT1O95170 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.12□□□□□ -0.15
CDRT1O95170 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDRT1O95170 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CDRT1O95170 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDRT1O95170 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.12□□□□□ -0.15
CDRT1O95170 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDRT1O95170 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDRT1O95170 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDRT1O95170 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDRT1O95170 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDRT1O95170 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDRT1O95170 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDRT1O95170 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDRT1O95170 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDRT1O95170 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDRT1O95170 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.11□□□□□ -0.15
CDRT1O95170 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.11□□□□□ -0.15
CDRT1O95170 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.11□□□□□ -0.15
CDRT1O95170 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDRT1O95170 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDRT1O95170 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms