Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.19■□□□□ 0.02
GSC2O15499 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.19■□□□□ 0.02
GSC2O15499 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
GSC2O15499 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.19■□□□□ 0.02
GSC2O15499 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
GSC2O15499 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.19■□□□□ 0.02
GSC2O15499 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.19■□□□□ 0.02
GSC2O15499 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
GSC2O15499 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 AL589702.1-201ENST00000641229 1509 ntBASIC15.19■□□□□ 0.02
GSC2O15499 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.19■□□□□ 0.02
GSC2O15499 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.19■□□□□ 0.02
GSC2O15499 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.19■□□□□ 0.02
GSC2O15499 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.19■□□□□ 0.02
GSC2O15499 DUX4L26-201ENST00000489078 1255 ntBASIC15.19■□□□□ 0.02
GSC2O15499 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.19■□□□□ 0.02
GSC2O15499 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
GSC2O15499 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.19■□□□□ 0.02
GSC2O15499 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.19■□□□□ 0.02
GSC2O15499 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
GSC2O15499 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.19■□□□□ 0.02
GSC2O15499 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.19■□□□□ 0.02
GSC2O15499 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
GSC2O15499 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
GSC2O15499 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.19■□□□□ 0.02
GSC2O15499 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.18■□□□□ 0.02
GSC2O15499 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.18■□□□□ 0.02
GSC2O15499 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
GSC2O15499 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
GSC2O15499 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.18■□□□□ 0.02
GSC2O15499 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
GSC2O15499 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 PMS2P4-201ENST00000412466 1052 ntBASIC15.18■□□□□ 0.02
GSC2O15499 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 TMPOP1-202ENST00000424642 1267 ntBASIC15.18■□□□□ 0.02
GSC2O15499 AC132008.2-207ENST00000454517 770 ntBASIC15.18■□□□□ 0.02
GSC2O15499 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 AC106795.1-205ENST00000512851 1056 ntBASIC15.18■□□□□ 0.02
GSC2O15499 MIR3909-201ENST00000579518 119 ntBASIC15.18■□□□□ 0.02
GSC2O15499 RN7SL850P-201ENST00000579959 291 ntBASIC15.18■□□□□ 0.02
GSC2O15499 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.18■□□□□ 0.02
GSC2O15499 AL591684.3-201ENST00000605187 298 ntBASIC15.18■□□□□ 0.02
GSC2O15499 AC079416.2-201ENST00000625035 1193 ntBASIC15.18■□□□□ 0.02
GSC2O15499 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
GSC2O15499 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
GSC2O15499 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.18■□□□□ 0.02
GSC2O15499 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
GSC2O15499 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
GSC2O15499 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.18■□□□□ 0.02
GSC2O15499 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GSC2O15499 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
GSC2O15499 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.17■□□□□ 0.02
GSC2O15499 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GSC2O15499 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GSC2O15499 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.17■□□□□ 0.02
GSC2O15499 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GSC2O15499 AC152010.1-201ENST00000415779 2006 ntBASIC15.17■□□□□ 0.02
GSC2O15499 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms