Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHL1O00533 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHL1O00533 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHL1O00533 AC005229.1-201ENST00000392885 409 ntBASIC20.02■□□□□ 0.8
CHL1O00533 AC092933.1-201ENST00000393644 945 ntBASIC20.02■□□□□ 0.8
CHL1O00533 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHL1O00533 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHL1O00533 ACA64.2-201ENST00000459014 129 ntBASIC20.02■□□□□ 0.8
CHL1O00533 AP001582.1-201ENST00000525856 295 ntBASIC20.02■□□□□ 0.8
CHL1O00533 HILS1-202ENST00000545329 423 ntBASIC20.02■□□□□ 0.8
CHL1O00533 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.02■□□□□ 0.8
CHL1O00533 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.02■□□□□ 0.8
CHL1O00533 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHL1O00533 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHL1O00533 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC20.02■□□□□ 0.8
CHL1O00533 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHL1O00533 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHL1O00533 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC20.02■□□□□ 0.79
CHL1O00533 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC20.02■□□□□ 0.79
CHL1O00533 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHL1O00533 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CHL1O00533 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.02■□□□□ 0.79
CHL1O00533 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC20.01■□□□□ 0.79
CHL1O00533 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHL1O00533 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHL1O00533 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC20.01■□□□□ 0.79
CHL1O00533 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHL1O00533 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CHL1O00533 AC007787.1-201ENST00000588095 1583 ntBASIC20.01■□□□□ 0.79
CHL1O00533 AC018665.1-201ENST00000622927 1362 ntBASIC20.01■□□□□ 0.79
CHL1O00533 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHL1O00533 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.01■□□□□ 0.79
CHL1O00533 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHL1O00533 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC20.01■□□□□ 0.79
CHL1O00533 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC20.01■□□□□ 0.79
CHL1O00533 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHL1O00533 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.01■□□□□ 0.79
CHL1O00533 CROCCP4-201ENST00000457096 498 ntBASIC20.01■□□□□ 0.79
CHL1O00533 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHL1O00533 PTP4A1P2-201ENST00000546033 454 ntBASIC20.01■□□□□ 0.79
CHL1O00533 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC20.01■□□□□ 0.79
CHL1O00533 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.01■□□□□ 0.79
CHL1O00533 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.01■□□□□ 0.79
CHL1O00533 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHL1O00533 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CHL1O00533 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC20.01■□□□□ 0.79
CHL1O00533 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHL1O00533 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHL1O00533 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.01■□□□□ 0.79
CHL1O00533 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CHL1O00533 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC20.01■□□□□ 0.79
CHL1O00533 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHL1O00533 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CHL1O00533 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHL1O00533 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CHL1O00533 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.01■□□□□ 0.79
CHL1O00533 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CHL1O00533 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20■□□□□ 0.79
CHL1O00533 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CHL1O00533 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC20■□□□□ 0.79
CHL1O00533 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
CHL1O00533 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20■□□□□ 0.79
CHL1O00533 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CHL1O00533 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20■□□□□ 0.79
CHL1O00533 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC20■□□□□ 0.79
CHL1O00533 AP005019.2-201ENST00000615104 511 ntBASIC20■□□□□ 0.79
CHL1O00533 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC20■□□□□ 0.79
CHL1O00533 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC20■□□□□ 0.79
CHL1O00533 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20■□□□□ 0.79
CHL1O00533 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC20■□□□□ 0.79
CHL1O00533 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC20■□□□□ 0.79
CHL1O00533 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC20■□□□□ 0.79
CHL1O00533 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20■□□□□ 0.79
CHL1O00533 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20■□□□□ 0.79
CHL1O00533 AC134312.5-201ENST00000568031 1313 ntBASIC20■□□□□ 0.79
CHL1O00533 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CHL1O00533 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CHL1O00533 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHL1O00533 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC19.99■□□□□ 0.79
CHL1O00533 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHL1O00533 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CHL1O00533 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CHL1O00533 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms