Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PDLIM1O00151 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PDLIM1O00151 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 AGAP7P-201ENST00000582299 2062 ntBASIC15.1■□□□□ 0.01
PDLIM1O00151 AGAP14-201ENST00000624701 2060 ntBASIC15.1■□□□□ 0.01
PDLIM1O00151 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 AC104109.2-201ENST00000602919 1418 ntBASIC15.1■□□□□ 0.01
PDLIM1O00151 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.1■□□□□ 0.01
PDLIM1O00151 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.1■□□□□ 0.01
PDLIM1O00151 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.1■□□□□ 0.01
PDLIM1O00151 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 AL671883.3-201ENST00000603274 991 ntBASIC15.1■□□□□ 0.01
PDLIM1O00151 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.1■□□□□ 0.01
PDLIM1O00151 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.1■□□□□ 0.01
PDLIM1O00151 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.1■□□□□ 0.01
PDLIM1O00151 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PDLIM1O00151 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
PDLIM1O00151 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.1■□□□□ 0.01
PDLIM1O00151 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.1■□□□□ 0.01
PDLIM1O00151 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.1■□□□□ 0.01
PDLIM1O00151 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PDLIM1O00151 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PDLIM1O00151 AC073869.1-201ENST00000415574 2762 ntBASIC15.09■□□□□ 0.01
PDLIM1O00151 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PDLIM1O00151 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.09■□□□□ 0.01
PDLIM1O00151 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.09■□□□□ 0.01
PDLIM1O00151 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PDLIM1O00151 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PDLIM1O00151 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
PDLIM1O00151 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.09■□□□□ 0.01
PDLIM1O00151 AC108751.1-201ENST00000490852 363 ntBASIC15.09■□□□□ 0.01
PDLIM1O00151 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PDLIM1O00151 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.09■□□□□ 0.01
PDLIM1O00151 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.09■□□□□ 0.01
PDLIM1O00151 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.09■□□□□ 0.01
PDLIM1O00151 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
PDLIM1O00151 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.09■□□□□ 0.01
PDLIM1O00151 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PDLIM1O00151 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PDLIM1O00151 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.09■□□□□ 0.01
PDLIM1O00151 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms