Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 AL133466.1-201ENST00000447582 150 ntBASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 AL391280.1-201ENST00000506969 1062 ntBASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 SPCS2P2-201ENST00000603270 608 ntBASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 AP001002.3-201ENST00000623482 206 ntBASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 KRT8P4-201ENST00000509735 1454 ntBASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC080080.1-201ENST00000625121 2420 ntBASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
LOC102724428A0A0B4J2F2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC005332.8-201ENST00000622750 2735 ntBASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 CHMP1AP1-201ENST00000445563 662 ntBASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 HIST2H2BB-201ENST00000449108 381 ntBASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC004066.1-201ENST00000502488 802 ntBASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 RN7SL774P-201ENST00000577467 290 ntBASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 U62317.3-201ENST00000608319 855 ntBASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC128714.1-201ENST00000637035 887 ntBASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LOC102724428A0A0B4J2F2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.71■□□□□ 0.74
LOC102724428A0A0B4J2F2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 MIR33B-201ENST00000385104 96 ntBASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 AL354877.1-201ENST00000424412 413 ntBASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 AC100850.1-201ENST00000506768 649 ntBASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 AC022217.1-201ENST00000521069 738 ntBASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 AL645939.5-201ENST00000606834 243 ntBASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LOC102724428A0A0B4J2F2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LOC102724428A0A0B4J2F2 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LOC102724428A0A0B4J2F2 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LOC102724428A0A0B4J2F2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LOC102724428A0A0B4J2F2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LOC102724428A0A0B4J2F2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LOC102724428A0A0B4J2F2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LOC102724428A0A0B4J2F2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LOC102724428A0A0B4J2F2 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.69■□□□□ 0.74
LOC102724428A0A0B4J2F2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LOC102724428A0A0B4J2F2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LOC102724428A0A0B4J2F2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LOC102724428A0A0B4J2F2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
LOC102724428A0A0B4J2F2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms