Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA9Q9Y5H5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHA9Q9Y5H5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHA9Q9Y5H5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHA9Q9Y5H5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHA9Q9Y5H5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHA9Q9Y5H5 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.45■■□□□ 1.18
PCDHA9Q9Y5H5 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHA9Q9Y5H5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
PCDHA9Q9Y5H5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PCDHA9Q9Y5H5 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
PCDHA9Q9Y5H5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHA9Q9Y5H5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHA9Q9Y5H5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHA9Q9Y5H5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHA9Q9Y5H5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHA9Q9Y5H5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHA9Q9Y5H5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHA9Q9Y5H5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHA9Q9Y5H5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHA9Q9Y5H5 AC018755.3-202ENST00000596210 929 ntBASIC22.44■■□□□ 1.18
PCDHA9Q9Y5H5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHA9Q9Y5H5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHA9Q9Y5H5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHA9Q9Y5H5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHA9Q9Y5H5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHA9Q9Y5H5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
PCDHA9Q9Y5H5 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PCDHA9Q9Y5H5 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
PCDHA9Q9Y5H5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHA9Q9Y5H5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHA9Q9Y5H5 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHA9Q9Y5H5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHA9Q9Y5H5 KRT18P60-201ENST00000312876 1297 ntBASIC22.42■■□□□ 1.18
PCDHA9Q9Y5H5 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDHA9Q9Y5H5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHA9Q9Y5H5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHA9Q9Y5H5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHA9Q9Y5H5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHA9Q9Y5H5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHA9Q9Y5H5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PCDHA9Q9Y5H5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHA9Q9Y5H5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHA9Q9Y5H5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHA9Q9Y5H5 DUX4L9-201ENST00000449051 1259 ntBASIC22.41■■□□□ 1.18
PCDHA9Q9Y5H5 AC129492.7-201ENST00000622992 756 ntBASIC22.41■■□□□ 1.18
PCDHA9Q9Y5H5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHA9Q9Y5H5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHA9Q9Y5H5 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHA9Q9Y5H5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHA9Q9Y5H5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHA9Q9Y5H5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
PCDHA9Q9Y5H5 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
PCDHA9Q9Y5H5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHA9Q9Y5H5 AC004812.2-201ENST00000611079 2094 ntBASIC22.4■■□□□ 1.18
PCDHA9Q9Y5H5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHA9Q9Y5H5 NTF6A-201ENST00000591175 560 ntBASIC22.4■■□□□ 1.18
PCDHA9Q9Y5H5 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHA9Q9Y5H5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHA9Q9Y5H5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHA9Q9Y5H5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHA9Q9Y5H5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
PCDHA9Q9Y5H5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
PCDHA9Q9Y5H5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHA9Q9Y5H5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHA9Q9Y5H5 MIR6765-201ENST00000614092 87 ntBASIC22.39■■□□□ 1.17
PCDHA9Q9Y5H5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHA9Q9Y5H5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
PCDHA9Q9Y5H5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHA9Q9Y5H5 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA9Q9Y5H5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
PCDHA9Q9Y5H5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
PCDHA9Q9Y5H5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA9Q9Y5H5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHA9Q9Y5H5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA9Q9Y5H5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA9Q9Y5H5 RPS2P7-201ENST00000447334 885 ntBASIC22.38■■□□□ 1.17
PCDHA9Q9Y5H5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA9Q9Y5H5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.38■■□□□ 1.17
PCDHA9Q9Y5H5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHA9Q9Y5H5 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA9Q9Y5H5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHA9Q9Y5H5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHA9Q9Y5H5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA9Q9Y5H5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA9Q9Y5H5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA9Q9Y5H5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHA9Q9Y5H5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHA9Q9Y5H5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PCDHA9Q9Y5H5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
PCDHA9Q9Y5H5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA9Q9Y5H5 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA9Q9Y5H5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDHA9Q9Y5H5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHA9Q9Y5H5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHA9Q9Y5H5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHA9Q9Y5H5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHA9Q9Y5H5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PCDHA9Q9Y5H5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDHA9Q9Y5H5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms