Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
RETREG1Q9H6L5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RETREG1Q9H6L5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RETREG1Q9H6L5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RETREG1Q9H6L5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.9■■□□□ 1.42
RETREG1Q9H6L5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RETREG1Q9H6L5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RETREG1Q9H6L5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RETREG1Q9H6L5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
RETREG1Q9H6L5 BX664725.1-201ENST00000438252 379 ntBASIC23.9■■□□□ 1.42
RETREG1Q9H6L5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.9■■□□□ 1.42
RETREG1Q9H6L5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RETREG1Q9H6L5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
RETREG1Q9H6L5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.9■■□□□ 1.42
RETREG1Q9H6L5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RETREG1Q9H6L5 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RETREG1Q9H6L5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RETREG1Q9H6L5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.89■■□□□ 1.42
RETREG1Q9H6L5 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.89■■□□□ 1.42
RETREG1Q9H6L5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RETREG1Q9H6L5 AC021242.3-201ENST00000607598 1377 ntBASIC23.89■■□□□ 1.41
RETREG1Q9H6L5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RETREG1Q9H6L5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
RETREG1Q9H6L5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RETREG1Q9H6L5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.88■■□□□ 1.41
RETREG1Q9H6L5 AF131216.4-201ENST00000638924 1588 ntBASIC23.88■■□□□ 1.41
RETREG1Q9H6L5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.88■■□□□ 1.41
RETREG1Q9H6L5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RETREG1Q9H6L5 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RETREG1Q9H6L5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RETREG1Q9H6L5 AL161729.1-201ENST00000604104 1402 ntBASIC23.87■■□□□ 1.41
RETREG1Q9H6L5 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.87■■□□□ 1.41
RETREG1Q9H6L5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.87■■□□□ 1.41
RETREG1Q9H6L5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.87■■□□□ 1.41
RETREG1Q9H6L5 AL035685.1-201ENST00000636663 812 ntBASIC23.87■■□□□ 1.41
RETREG1Q9H6L5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.87■■□□□ 1.41
RETREG1Q9H6L5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.87■■□□□ 1.41
RETREG1Q9H6L5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RETREG1Q9H6L5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RETREG1Q9H6L5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RETREG1Q9H6L5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RETREG1Q9H6L5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.86■■□□□ 1.41
RETREG1Q9H6L5 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RETREG1Q9H6L5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RETREG1Q9H6L5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.86■■□□□ 1.41
RETREG1Q9H6L5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RETREG1Q9H6L5 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.85■■□□□ 1.41
RETREG1Q9H6L5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETREG1Q9H6L5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.85■■□□□ 1.41
RETREG1Q9H6L5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.85■■□□□ 1.41
RETREG1Q9H6L5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETREG1Q9H6L5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.85■■□□□ 1.41
RETREG1Q9H6L5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETREG1Q9H6L5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RETREG1Q9H6L5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.85■■□□□ 1.41
RETREG1Q9H6L5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETREG1Q9H6L5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
RETREG1Q9H6L5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG1Q9H6L5 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG1Q9H6L5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG1Q9H6L5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.84■■□□□ 1.41
RETREG1Q9H6L5 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.84■■□□□ 1.41
RETREG1Q9H6L5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.84■■□□□ 1.41
RETREG1Q9H6L5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG1Q9H6L5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.84■■□□□ 1.41
RETREG1Q9H6L5 KRT125P-201ENST00000546827 989 ntBASIC23.84■■□□□ 1.41
RETREG1Q9H6L5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
RETREG1Q9H6L5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG1Q9H6L5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.84■■□□□ 1.41
RETREG1Q9H6L5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG1Q9H6L5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RETREG1Q9H6L5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RETREG1Q9H6L5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.83■■□□□ 1.41
RETREG1Q9H6L5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RETREG1Q9H6L5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
RETREG1Q9H6L5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RETREG1Q9H6L5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.83■■□□□ 1.41
RETREG1Q9H6L5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RETREG1Q9H6L5 AC138932.3-201ENST00000567634 1902 ntBASIC23.82■■□□□ 1.4
RETREG1Q9H6L5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RETREG1Q9H6L5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RETREG1Q9H6L5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RETREG1Q9H6L5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RETREG1Q9H6L5 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.82■■□□□ 1.4
RETREG1Q9H6L5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.82■■□□□ 1.4
RETREG1Q9H6L5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.82■■□□□ 1.4
RETREG1Q9H6L5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.81■■□□□ 1.4
RETREG1Q9H6L5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
RETREG1Q9H6L5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.81■■□□□ 1.4
RETREG1Q9H6L5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.81■■□□□ 1.4
RETREG1Q9H6L5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.81■■□□□ 1.4
RETREG1Q9H6L5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RETREG1Q9H6L5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RETREG1Q9H6L5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RETREG1Q9H6L5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RETREG1Q9H6L5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RETREG1Q9H6L5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RETREG1Q9H6L5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RETREG1Q9H6L5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.8■■□□□ 1.4
RETREG1Q9H6L5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms