Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLIRPQ9GZT3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.66■□□□□ 0.9
SLIRPQ9GZT3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.65■□□□□ 0.9
SLIRPQ9GZT3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLIRPQ9GZT3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.65■□□□□ 0.9
SLIRPQ9GZT3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.65■□□□□ 0.9
SLIRPQ9GZT3 GUSBP5-202ENST00000510805 1989 ntBASIC20.65■□□□□ 0.9
SLIRPQ9GZT3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SLIRPQ9GZT3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLIRPQ9GZT3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SLIRPQ9GZT3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.64■□□□□ 0.89
SLIRPQ9GZT3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLIRPQ9GZT3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SLIRPQ9GZT3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLIRPQ9GZT3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLIRPQ9GZT3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.64■□□□□ 0.89
SLIRPQ9GZT3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SLIRPQ9GZT3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.64■□□□□ 0.89
SLIRPQ9GZT3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SLIRPQ9GZT3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SLIRPQ9GZT3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLIRPQ9GZT3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLIRPQ9GZT3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLIRPQ9GZT3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLIRPQ9GZT3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLIRPQ9GZT3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SLIRPQ9GZT3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SLIRPQ9GZT3 SLC25A24-204ENST00000569674 2357 ntBASIC20.63■□□□□ 0.89
SLIRPQ9GZT3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.63■□□□□ 0.89
SLIRPQ9GZT3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.62■□□□□ 0.89
SLIRPQ9GZT3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLIRPQ9GZT3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLIRPQ9GZT3 RARRES2P7-201ENST00000567349 469 ntBASIC20.62■□□□□ 0.89
SLIRPQ9GZT3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SLIRPQ9GZT3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SLIRPQ9GZT3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SLIRPQ9GZT3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLIRPQ9GZT3 ECEL1P1-201ENST00000373592 1742 ntBASIC20.61■□□□□ 0.89
SLIRPQ9GZT3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLIRPQ9GZT3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.61■□□□□ 0.89
SLIRPQ9GZT3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SLIRPQ9GZT3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SLIRPQ9GZT3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
SLIRPQ9GZT3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLIRPQ9GZT3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLIRPQ9GZT3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SLIRPQ9GZT3 MIR6089-201ENST00000616698 64 ntBASIC20.6■□□□□ 0.89
SLIRPQ9GZT3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SLIRPQ9GZT3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLIRPQ9GZT3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLIRPQ9GZT3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLIRPQ9GZT3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SLIRPQ9GZT3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLIRPQ9GZT3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLIRPQ9GZT3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
SLIRPQ9GZT3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.59■□□□□ 0.89
SLIRPQ9GZT3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLIRPQ9GZT3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLIRPQ9GZT3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.59■□□□□ 0.89
SLIRPQ9GZT3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SLIRPQ9GZT3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLIRPQ9GZT3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLIRPQ9GZT3 FOXO3B-201ENST00000395675 1928 ntBASIC20.59■□□□□ 0.89
SLIRPQ9GZT3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SLIRPQ9GZT3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLIRPQ9GZT3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SLIRPQ9GZT3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SLIRPQ9GZT3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SLIRPQ9GZT3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SLIRPQ9GZT3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SLIRPQ9GZT3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLIRPQ9GZT3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SLIRPQ9GZT3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SLIRPQ9GZT3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLIRPQ9GZT3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLIRPQ9GZT3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLIRPQ9GZT3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
SLIRPQ9GZT3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SLIRPQ9GZT3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLIRPQ9GZT3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLIRPQ9GZT3 AL137060.1-201ENST00000618151 2648 ntBASIC20.56■□□□□ 0.88
SLIRPQ9GZT3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.56■□□□□ 0.88
SLIRPQ9GZT3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SLIRPQ9GZT3 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.56■□□□□ 0.88
SLIRPQ9GZT3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLIRPQ9GZT3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SLIRPQ9GZT3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SLIRPQ9GZT3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.56■□□□□ 0.88
SLIRPQ9GZT3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SLIRPQ9GZT3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLIRPQ9GZT3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLIRPQ9GZT3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.55■□□□□ 0.88
SLIRPQ9GZT3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLIRPQ9GZT3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLIRPQ9GZT3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.55■□□□□ 0.88
SLIRPQ9GZT3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SLIRPQ9GZT3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLIRPQ9GZT3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SLIRPQ9GZT3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLIRPQ9GZT3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms