Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CFAP54Q96N23 YBX1P1-201ENST00000445822 960 ntBASIC23.25■■□□□ 1.31
CFAP54Q96N23 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.25■■□□□ 1.31
CFAP54Q96N23 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP54Q96N23 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CFAP54Q96N23 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP54Q96N23 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP54Q96N23 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CFAP54Q96N23 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.24■■□□□ 1.31
CFAP54Q96N23 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CFAP54Q96N23 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP54Q96N23 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP54Q96N23 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.23■■□□□ 1.31
CFAP54Q96N23 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
CFAP54Q96N23 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
CFAP54Q96N23 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP54Q96N23 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CFAP54Q96N23 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP54Q96N23 DUX4L2-201ENST00000561772 1275 ntBASIC23.22■■□□□ 1.31
CFAP54Q96N23 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.22■■□□□ 1.31
CFAP54Q96N23 DUX4L6-201ENST00000626483 1275 ntBASIC23.22■■□□□ 1.31
CFAP54Q96N23 DUX4L1-201ENST00000627662 1275 ntBASIC23.22■■□□□ 1.31
CFAP54Q96N23 DUX4L8-201ENST00000629013 1275 ntBASIC23.22■■□□□ 1.31
CFAP54Q96N23 DUX4L3-201ENST00000630187 1275 ntBASIC23.22■■□□□ 1.31
CFAP54Q96N23 DUX4L7-201ENST00000630678 1275 ntBASIC23.22■■□□□ 1.31
CFAP54Q96N23 DUX4L5-201ENST00000630834 1275 ntBASIC23.22■■□□□ 1.31
CFAP54Q96N23 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.22■■□□□ 1.31
CFAP54Q96N23 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP54Q96N23 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.22■■□□□ 1.31
CFAP54Q96N23 KRT18P10-201ENST00000388836 1287 ntBASIC23.22■■□□□ 1.31
CFAP54Q96N23 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CFAP54Q96N23 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CFAP54Q96N23 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CFAP54Q96N23 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CFAP54Q96N23 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.21■■□□□ 1.31
CFAP54Q96N23 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP54Q96N23 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.2■■□□□ 1.3
CFAP54Q96N23 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.2■■□□□ 1.3
CFAP54Q96N23 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP54Q96N23 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.2■■□□□ 1.3
CFAP54Q96N23 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CFAP54Q96N23 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CFAP54Q96N23 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.19■■□□□ 1.3
CFAP54Q96N23 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP54Q96N23 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP54Q96N23 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP54Q96N23 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP54Q96N23 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFAP54Q96N23 DUX4L19-201ENST00000557448 1267 ntBASIC23.19■■□□□ 1.3
CFAP54Q96N23 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.19■■□□□ 1.3
CFAP54Q96N23 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.19■■□□□ 1.3
CFAP54Q96N23 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CFAP54Q96N23 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CFAP54Q96N23 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CFAP54Q96N23 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.18■■□□□ 1.3
CFAP54Q96N23 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.18■■□□□ 1.3
CFAP54Q96N23 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CFAP54Q96N23 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.18■■□□□ 1.3
CFAP54Q96N23 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.18■■□□□ 1.3
CFAP54Q96N23 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.18■■□□□ 1.3
CFAP54Q96N23 SYT6-210ENST00000641643 1587 ntBASIC23.17■■□□□ 1.3
CFAP54Q96N23 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.17■■□□□ 1.3
CFAP54Q96N23 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP54Q96N23 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFAP54Q96N23 AP002414.2-202ENST00000590929 1450 ntBASIC23.17■■□□□ 1.3
CFAP54Q96N23 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.17■■□□□ 1.3
CFAP54Q96N23 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.17■■□□□ 1.3
CFAP54Q96N23 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
CFAP54Q96N23 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.16■■□□□ 1.3
CFAP54Q96N23 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP54Q96N23 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.16■■□□□ 1.3
CFAP54Q96N23 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.16■■□□□ 1.3
CFAP54Q96N23 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.16■■□□□ 1.3
CFAP54Q96N23 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP54Q96N23 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
CFAP54Q96N23 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP54Q96N23 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CFAP54Q96N23 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP54Q96N23 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP54Q96N23 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.15■■□□□ 1.3
CFAP54Q96N23 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.15■■□□□ 1.3
CFAP54Q96N23 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CFAP54Q96N23 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CFAP54Q96N23 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
CFAP54Q96N23 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CFAP54Q96N23 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.14■■□□□ 1.3
CFAP54Q96N23 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP54Q96N23 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP54Q96N23 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
CFAP54Q96N23 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CFAP54Q96N23 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CFAP54Q96N23 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.13■■□□□ 1.29
CFAP54Q96N23 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.13■■□□□ 1.29
CFAP54Q96N23 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP54Q96N23 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.13■■□□□ 1.29
CFAP54Q96N23 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CFAP54Q96N23 AC004448.1-201ENST00000458332 883 ntBASIC23.13■■□□□ 1.29
CFAP54Q96N23 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.13■■□□□ 1.29
CFAP54Q96N23 SNX5-217ENST00000606557 1087 ntBASIC23.13■■□□□ 1.29
CFAP54Q96N23 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms