Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PRICKLE1Q96MT3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.14■■□□□ 1.46
PRICKLE1Q96MT3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.14■■□□□ 1.46
PRICKLE1Q96MT3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PRICKLE1Q96MT3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
PRICKLE1Q96MT3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PRICKLE1Q96MT3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PRICKLE1Q96MT3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.14■■□□□ 1.45
PRICKLE1Q96MT3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.14■■□□□ 1.45
PRICKLE1Q96MT3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
PRICKLE1Q96MT3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.13■■□□□ 1.45
PRICKLE1Q96MT3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PRICKLE1Q96MT3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PRICKLE1Q96MT3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
PRICKLE1Q96MT3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PRICKLE1Q96MT3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
PRICKLE1Q96MT3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PRICKLE1Q96MT3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PRICKLE1Q96MT3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PRICKLE1Q96MT3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PRICKLE1Q96MT3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
PRICKLE1Q96MT3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PRICKLE1Q96MT3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PRICKLE1Q96MT3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PRICKLE1Q96MT3 AC021242.3-201ENST00000607598 1377 ntBASIC24.12■■□□□ 1.45
PRICKLE1Q96MT3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PRICKLE1Q96MT3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.12■■□□□ 1.45
PRICKLE1Q96MT3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PRICKLE1Q96MT3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.11■■□□□ 1.45
PRICKLE1Q96MT3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.11■■□□□ 1.45
PRICKLE1Q96MT3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
PRICKLE1Q96MT3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PRICKLE1Q96MT3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PRICKLE1Q96MT3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PRICKLE1Q96MT3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.11■■□□□ 1.45
PRICKLE1Q96MT3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.11■■□□□ 1.45
PRICKLE1Q96MT3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.11■■□□□ 1.45
PRICKLE1Q96MT3 AF131216.4-201ENST00000638924 1588 ntBASIC24.11■■□□□ 1.45
PRICKLE1Q96MT3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PRICKLE1Q96MT3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PRICKLE1Q96MT3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PRICKLE1Q96MT3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.1■■□□□ 1.45
PRICKLE1Q96MT3 KRT125P-201ENST00000546827 989 ntBASIC24.1■■□□□ 1.45
PRICKLE1Q96MT3 MIR4787-201ENST00000607364 84 ntBASIC24.1■■□□□ 1.45
PRICKLE1Q96MT3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
PRICKLE1Q96MT3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PRICKLE1Q96MT3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.1■■□□□ 1.45
PRICKLE1Q96MT3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PRICKLE1Q96MT3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PRICKLE1Q96MT3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.09■■□□□ 1.45
PRICKLE1Q96MT3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.09■■□□□ 1.45
PRICKLE1Q96MT3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PRICKLE1Q96MT3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PRICKLE1Q96MT3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.08■■□□□ 1.45
PRICKLE1Q96MT3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PRICKLE1Q96MT3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
PRICKLE1Q96MT3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PRICKLE1Q96MT3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PRICKLE1Q96MT3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
PRICKLE1Q96MT3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.07■■□□□ 1.44
PRICKLE1Q96MT3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PRICKLE1Q96MT3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.06■■□□□ 1.44
PRICKLE1Q96MT3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRICKLE1Q96MT3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
PRICKLE1Q96MT3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRICKLE1Q96MT3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
PRICKLE1Q96MT3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
PRICKLE1Q96MT3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.06■■□□□ 1.44
PRICKLE1Q96MT3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.06■■□□□ 1.44
PRICKLE1Q96MT3 MIR6089-201ENST00000616698 64 ntBASIC24.06■■□□□ 1.44
PRICKLE1Q96MT3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PRICKLE1Q96MT3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
PRICKLE1Q96MT3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PRICKLE1Q96MT3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PRICKLE1Q96MT3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PRICKLE1Q96MT3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.05■■□□□ 1.44
PRICKLE1Q96MT3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PRICKLE1Q96MT3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PRICKLE1Q96MT3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PRICKLE1Q96MT3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.04■■□□□ 1.44
PRICKLE1Q96MT3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.04■■□□□ 1.44
PRICKLE1Q96MT3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms