Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP9XQ93008 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP9XQ93008 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
USP9XQ93008 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.72■□□□□ 0.91
USP9XQ93008 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
USP9XQ93008 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.72■□□□□ 0.91
USP9XQ93008 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP9XQ93008 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.71■□□□□ 0.91
USP9XQ93008 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP9XQ93008 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP9XQ93008 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.71■□□□□ 0.91
USP9XQ93008 DUX4L19-201ENST00000557448 1267 ntBASIC20.71■□□□□ 0.91
USP9XQ93008 AC011298.3-201ENST00000615796 283 ntBASIC20.71■□□□□ 0.91
USP9XQ93008 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP9XQ93008 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP9XQ93008 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP9XQ93008 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USP9XQ93008 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP9XQ93008 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
USP9XQ93008 KRT18P5-201ENST00000436075 1291 ntBASIC20.69■□□□□ 0.9
USP9XQ93008 MIR6722-201ENST00000617286 78 ntBASIC20.69■□□□□ 0.9
USP9XQ93008 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.69■□□□□ 0.9
USP9XQ93008 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP9XQ93008 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP9XQ93008 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.69■□□□□ 0.9
USP9XQ93008 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
USP9XQ93008 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP9XQ93008 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP9XQ93008 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USP9XQ93008 DUX4L2-201ENST00000561772 1275 ntBASIC20.68■□□□□ 0.9
USP9XQ93008 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
USP9XQ93008 DUX4L6-201ENST00000626483 1275 ntBASIC20.68■□□□□ 0.9
USP9XQ93008 DUX4L1-201ENST00000627662 1275 ntBASIC20.68■□□□□ 0.9
USP9XQ93008 DUX4L8-201ENST00000629013 1275 ntBASIC20.68■□□□□ 0.9
USP9XQ93008 DUX4L3-201ENST00000630187 1275 ntBASIC20.68■□□□□ 0.9
USP9XQ93008 DUX4L7-201ENST00000630678 1275 ntBASIC20.68■□□□□ 0.9
USP9XQ93008 DUX4L5-201ENST00000630834 1275 ntBASIC20.68■□□□□ 0.9
USP9XQ93008 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP9XQ93008 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP9XQ93008 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.67■□□□□ 0.9
USP9XQ93008 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP9XQ93008 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.67■□□□□ 0.9
USP9XQ93008 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP9XQ93008 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP9XQ93008 AL137784.2-201ENST00000607332 1000 ntBASIC20.67■□□□□ 0.9
USP9XQ93008 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP9XQ93008 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP9XQ93008 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP9XQ93008 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.66■□□□□ 0.9
USP9XQ93008 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.66■□□□□ 0.9
USP9XQ93008 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP9XQ93008 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.66■□□□□ 0.9
USP9XQ93008 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP9XQ93008 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP9XQ93008 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.65■□□□□ 0.9
USP9XQ93008 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.65■□□□□ 0.9
USP9XQ93008 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP9XQ93008 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP9XQ93008 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP9XQ93008 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP9XQ93008 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP9XQ93008 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
USP9XQ93008 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.65■□□□□ 0.9
USP9XQ93008 ABCB10P1-201ENST00000614297 2181 ntBASIC20.64■□□□□ 0.9
USP9XQ93008 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP9XQ93008 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
USP9XQ93008 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.64■□□□□ 0.9
USP9XQ93008 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
USP9XQ93008 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP9XQ93008 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
USP9XQ93008 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP9XQ93008 ABHD17AP1-201ENST00000358206 933 ntBASIC20.64■□□□□ 0.89
USP9XQ93008 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
USP9XQ93008 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.64■□□□□ 0.89
USP9XQ93008 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP9XQ93008 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.64■□□□□ 0.89
USP9XQ93008 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.64■□□□□ 0.89
USP9XQ93008 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP9XQ93008 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
USP9XQ93008 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP9XQ93008 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
USP9XQ93008 AL138724.1-201ENST00000606771 1088 ntBASIC20.63■□□□□ 0.89
USP9XQ93008 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP9XQ93008 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
USP9XQ93008 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP9XQ93008 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.63■□□□□ 0.89
USP9XQ93008 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.62■□□□□ 0.89
USP9XQ93008 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
USP9XQ93008 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.62■□□□□ 0.89
USP9XQ93008 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
USP9XQ93008 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
USP9XQ93008 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP9XQ93008 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP9XQ93008 AC004448.1-201ENST00000458332 883 ntBASIC20.62■□□□□ 0.89
USP9XQ93008 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP9XQ93008 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
USP9XQ93008 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP9XQ93008 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
USP9XQ93008 AC099791.1-201ENST00000416440 715 ntBASIC20.61■□□□□ 0.89
USP9XQ93008 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms