Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
TMEM40Q8WWA1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.69■■□□□ 1.7
TMEM40Q8WWA1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
TMEM40Q8WWA1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.68■■□□□ 1.7
TMEM40Q8WWA1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TMEM40Q8WWA1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.68■■□□□ 1.7
TMEM40Q8WWA1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TMEM40Q8WWA1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TMEM40Q8WWA1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.67■■□□□ 1.7
TMEM40Q8WWA1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
TMEM40Q8WWA1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.67■■□□□ 1.7
TMEM40Q8WWA1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.66■■□□□ 1.7
TMEM40Q8WWA1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.66■■□□□ 1.7
TMEM40Q8WWA1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
TMEM40Q8WWA1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMEM40Q8WWA1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMEM40Q8WWA1 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.65■■□□□ 1.7
TMEM40Q8WWA1 SNX5-217ENST00000606557 1087 ntBASIC25.65■■□□□ 1.7
TMEM40Q8WWA1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.65■■□□□ 1.7
TMEM40Q8WWA1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TMEM40Q8WWA1 MIR4466-201ENST00000606121 54 ntBASIC25.64■■□□□ 1.7
TMEM40Q8WWA1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
TMEM40Q8WWA1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TMEM40Q8WWA1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM40Q8WWA1 AL136116.3-201ENST00000402907 1138 ntBASIC25.63■■□□□ 1.69
TMEM40Q8WWA1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.63■■□□□ 1.69
TMEM40Q8WWA1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.63■■□□□ 1.69
TMEM40Q8WWA1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.63■■□□□ 1.69
TMEM40Q8WWA1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM40Q8WWA1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
TMEM40Q8WWA1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM40Q8WWA1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TMEM40Q8WWA1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.62■■□□□ 1.69
TMEM40Q8WWA1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TMEM40Q8WWA1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
TMEM40Q8WWA1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
TMEM40Q8WWA1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TMEM40Q8WWA1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.61■■□□□ 1.69
TMEM40Q8WWA1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.61■■□□□ 1.69
TMEM40Q8WWA1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.61■■□□□ 1.69
TMEM40Q8WWA1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.61■■□□□ 1.69
TMEM40Q8WWA1 AL356740.2-201ENST00000601559 647 ntBASIC25.61■■□□□ 1.69
TMEM40Q8WWA1 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.61■■□□□ 1.69
TMEM40Q8WWA1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TMEM40Q8WWA1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TMEM40Q8WWA1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
TMEM40Q8WWA1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
TMEM40Q8WWA1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
TMEM40Q8WWA1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TMEM40Q8WWA1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.6■■□□□ 1.69
TMEM40Q8WWA1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TMEM40Q8WWA1 AL512631.2-201ENST00000604634 923 ntBASIC25.6■■□□□ 1.69
TMEM40Q8WWA1 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TMEM40Q8WWA1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
TMEM40Q8WWA1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.59■■□□□ 1.69
TMEM40Q8WWA1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
TMEM40Q8WWA1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TMEM40Q8WWA1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.59■■□□□ 1.69
TMEM40Q8WWA1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
TMEM40Q8WWA1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
TMEM40Q8WWA1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.58■■□□□ 1.69
TMEM40Q8WWA1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
TMEM40Q8WWA1 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.58■■□□□ 1.69
TMEM40Q8WWA1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TMEM40Q8WWA1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.58■■□□□ 1.69
TMEM40Q8WWA1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TMEM40Q8WWA1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.57■■□□□ 1.68
TMEM40Q8WWA1 MIR638-201ENST00000385237 100 ntBASIC25.57■■□□□ 1.68
TMEM40Q8WWA1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.57■■□□□ 1.68
TMEM40Q8WWA1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
TMEM40Q8WWA1 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.57■■□□□ 1.68
TMEM40Q8WWA1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TMEM40Q8WWA1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.57■■□□□ 1.68
TMEM40Q8WWA1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TMEM40Q8WWA1 SLC6A10P-202ENST00000431994 2058 ntBASIC25.57■■□□□ 1.68
TMEM40Q8WWA1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TMEM40Q8WWA1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TMEM40Q8WWA1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TMEM40Q8WWA1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TMEM40Q8WWA1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TMEM40Q8WWA1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
TMEM40Q8WWA1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TMEM40Q8WWA1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.56■■□□□ 1.68
TMEM40Q8WWA1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TMEM40Q8WWA1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TMEM40Q8WWA1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.55■■□□□ 1.68
TMEM40Q8WWA1 DUSP8P4-201ENST00000399538 1761 ntBASIC25.55■■□□□ 1.68
TMEM40Q8WWA1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
TMEM40Q8WWA1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.55■■□□□ 1.68
TMEM40Q8WWA1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.55■■□□□ 1.68
TMEM40Q8WWA1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.55■■□□□ 1.68
TMEM40Q8WWA1 MIR6722-201ENST00000617286 78 ntBASIC25.55■■□□□ 1.68
TMEM40Q8WWA1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.55■■□□□ 1.68
TMEM40Q8WWA1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.55■■□□□ 1.68
TMEM40Q8WWA1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.55■■□□□ 1.68
TMEM40Q8WWA1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.54■■□□□ 1.68
TMEM40Q8WWA1 AL139246.5-201ENST00000606645 996 ntBASIC25.54■■□□□ 1.68
TMEM40Q8WWA1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TMEM40Q8WWA1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.53■■□□□ 1.68
TMEM40Q8WWA1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms