Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CCDC168Q8NDH2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC168Q8NDH2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC168Q8NDH2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 DUX4L2-201ENST00000561772 1275 ntBASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 AC011298.3-201ENST00000615796 283 ntBASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 DUX4L6-201ENST00000626483 1275 ntBASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 DUX4L1-201ENST00000627662 1275 ntBASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 DUX4L8-201ENST00000629013 1275 ntBASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 DUX4L3-201ENST00000630187 1275 ntBASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 DUX4L7-201ENST00000630678 1275 ntBASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 DUX4L5-201ENST00000630834 1275 ntBASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC168Q8NDH2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CCDC168Q8NDH2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC168Q8NDH2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC168Q8NDH2 MIR6722-201ENST00000617286 78 ntBASIC19.79■□□□□ 0.76
CCDC168Q8NDH2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC168Q8NDH2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC168Q8NDH2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC168Q8NDH2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CCDC168Q8NDH2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CCDC168Q8NDH2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.78■□□□□ 0.76
CCDC168Q8NDH2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC168Q8NDH2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC168Q8NDH2 ABHD17AP1-201ENST00000358206 933 ntBASIC19.77■□□□□ 0.76
CCDC168Q8NDH2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CCDC168Q8NDH2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC168Q8NDH2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CCDC168Q8NDH2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC168Q8NDH2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC168Q8NDH2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC168Q8NDH2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CCDC168Q8NDH2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.76■□□□□ 0.75
CCDC168Q8NDH2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC168Q8NDH2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC168Q8NDH2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC168Q8NDH2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC168Q8NDH2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC168Q8NDH2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC168Q8NDH2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC168Q8NDH2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC168Q8NDH2 AL138724.1-201ENST00000606771 1088 ntBASIC19.76■□□□□ 0.75
CCDC168Q8NDH2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC168Q8NDH2 AC004448.1-201ENST00000458332 883 ntBASIC19.75■□□□□ 0.75
CCDC168Q8NDH2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC168Q8NDH2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC168Q8NDH2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC168Q8NDH2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC168Q8NDH2 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.75■□□□□ 0.75
CCDC168Q8NDH2 KRT18P5-201ENST00000436075 1291 ntBASIC19.75■□□□□ 0.75
CCDC168Q8NDH2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC168Q8NDH2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC168Q8NDH2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC168Q8NDH2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC168Q8NDH2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC168Q8NDH2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CCDC168Q8NDH2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC168Q8NDH2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC168Q8NDH2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC168Q8NDH2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC168Q8NDH2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC168Q8NDH2 ABCB10P1-201ENST00000614297 2181 ntBASIC19.73■□□□□ 0.75
CCDC168Q8NDH2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC168Q8NDH2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC168Q8NDH2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC168Q8NDH2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC168Q8NDH2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC168Q8NDH2 YBX1P1-201ENST00000445822 960 ntBASIC19.73■□□□□ 0.75
CCDC168Q8NDH2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC168Q8NDH2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC168Q8NDH2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC168Q8NDH2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.73■□□□□ 0.75
CCDC168Q8NDH2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC168Q8NDH2 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC168Q8NDH2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC168Q8NDH2 AC005703.6-201ENST00000623265 1329 ntBASIC19.72■□□□□ 0.75
CCDC168Q8NDH2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC168Q8NDH2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC168Q8NDH2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC168Q8NDH2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC168Q8NDH2 AC099791.1-201ENST00000416440 715 ntBASIC19.71■□□□□ 0.75
CCDC168Q8NDH2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC168Q8NDH2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC168Q8NDH2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC168Q8NDH2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC168Q8NDH2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC168Q8NDH2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC168Q8NDH2 AC066615.1-201ENST00000640911 628 ntBASIC19.71■□□□□ 0.75
CCDC168Q8NDH2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC168Q8NDH2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC168Q8NDH2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms