Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC190Q86UF4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC190Q86UF4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC190Q86UF4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC190Q86UF4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC190Q86UF4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC190Q86UF4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC190Q86UF4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC190Q86UF4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC190Q86UF4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC190Q86UF4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC190Q86UF4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC190Q86UF4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC190Q86UF4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC190Q86UF4 GUSBP5-202ENST00000510805 1989 ntBASIC20.39■□□□□ 0.86
CCDC190Q86UF4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC190Q86UF4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC190Q86UF4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC190Q86UF4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CCDC190Q86UF4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC190Q86UF4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC190Q86UF4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC190Q86UF4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC190Q86UF4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CCDC190Q86UF4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC190Q86UF4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC190Q86UF4 RARRES2P7-201ENST00000567349 469 ntBASIC20.38■□□□□ 0.85
CCDC190Q86UF4 MIR6089-201ENST00000616698 64 ntBASIC20.38■□□□□ 0.85
CCDC190Q86UF4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC190Q86UF4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC190Q86UF4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC190Q86UF4 ECEL1P1-201ENST00000373592 1742 ntBASIC20.38■□□□□ 0.85
CCDC190Q86UF4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC190Q86UF4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC190Q86UF4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC190Q86UF4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC190Q86UF4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC190Q86UF4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC190Q86UF4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC190Q86UF4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC190Q86UF4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC190Q86UF4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC190Q86UF4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC190Q86UF4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC190Q86UF4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC190Q86UF4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC190Q86UF4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC190Q86UF4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC190Q86UF4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC190Q86UF4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC190Q86UF4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC190Q86UF4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC190Q86UF4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC190Q86UF4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC190Q86UF4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC190Q86UF4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC190Q86UF4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC190Q86UF4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CCDC190Q86UF4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC190Q86UF4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCDC190Q86UF4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC190Q86UF4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC190Q86UF4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC190Q86UF4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC190Q86UF4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCDC190Q86UF4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CCDC190Q86UF4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC190Q86UF4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC190Q86UF4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC190Q86UF4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC190Q86UF4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC190Q86UF4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CCDC190Q86UF4 FOXO3B-201ENST00000395675 1928 ntBASIC20.33■□□□□ 0.85
CCDC190Q86UF4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CCDC190Q86UF4 SLC25A24-204ENST00000569674 2357 ntBASIC20.33■□□□□ 0.85
CCDC190Q86UF4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC190Q86UF4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CCDC190Q86UF4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC190Q86UF4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC190Q86UF4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC190Q86UF4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC190Q86UF4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC190Q86UF4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC190Q86UF4 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC190Q86UF4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC190Q86UF4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC190Q86UF4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC190Q86UF4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CCDC190Q86UF4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC190Q86UF4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC190Q86UF4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC190Q86UF4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC190Q86UF4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.31■□□□□ 0.84
CCDC190Q86UF4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC190Q86UF4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC190Q86UF4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
CCDC190Q86UF4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC190Q86UF4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC190Q86UF4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC190Q86UF4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms