Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 MTC5YDR128W 3447 nt5.49□□□□□ -1.53
DDC1Q08949 ODC2YOR222W 924 nt5.49□□□□□ -1.53
DDC1Q08949 CCZ1YBR131W 2115 nt5.49□□□□□ -1.53
DDC1Q08949 DDC1YPL194W 1839 nt5.48□□□□□ -1.53
DDC1Q08949 RSC2YLR357W 2670 nt5.48□□□□□ -1.53
DDC1Q08949 THI21YPL258C 1656 nt5.48□□□□□ -1.53
DDC1Q08949 YIL060WYIL060W 435 nt5.48□□□□□ -1.53
DDC1Q08949 PRP45YAL032C 1140 nt5.48□□□□□ -1.53
DDC1Q08949 APN1YKL114C 1104 nt5.48□□□□□ -1.53
DDC1Q08949 ROX3YBL093C 663 nt5.48□□□□□ -1.53
DDC1Q08949 PSH1YOL054W 1221 nt5.48□□□□□ -1.53
DDC1Q08949 ROG3YFR022W 2202 nt5.48□□□□□ -1.53
DDC1Q08949 HRP1YOL123W 1605 nt5.48□□□□□ -1.53
DDC1Q08949 TFC6YDR362C 2019 nt5.47□□□□□ -1.53
DDC1Q08949 SIP2YGL208W 1248 nt5.47□□□□□ -1.53
DDC1Q08949 RHO3YIL118W 696 nt5.47□□□□□ -1.53
DDC1Q08949 ASH1YKL185W 1767 nt5.47□□□□□ -1.53
DDC1Q08949 ULA1YPL003W 1389 nt5.46□□□□□ -1.54
DDC1Q08949 SUA5YGL169W 1281 nt5.46□□□□□ -1.54
DDC1Q08949 VAM7YGL212W 951 nt5.46□□□□□ -1.54
DDC1Q08949 YBL044WYBL044W 369 nt5.46□□□□□ -1.54
DDC1Q08949 RRT2YBR246W 1164 nt5.46□□□□□ -1.54
DDC1Q08949 ATP14YLR295C 375 nt5.45□□□□□ -1.54
DDC1Q08949 HST2YPL015C 1074 nt5.45□□□□□ -1.54
DDC1Q08949 YPR098CYPR098C 486 nt5.45□□□□□ -1.54
DDC1Q08949 QRI1YDL103C 1434 nt5.45□□□□□ -1.54
DDC1Q08949 YDL023CYDL023C 321 nt5.44□□□□□ -1.54
DDC1Q08949 YDR134CYDR134C 411 nt5.44□□□□□ -1.54
DDC1Q08949 RHO2YNL090W 579 nt5.44□□□□□ -1.54
DDC1Q08949 RPS19BYNL302C 435 nt5.44□□□□□ -1.54
DDC1Q08949 DFG5YMR238W 1377 nt5.43□□□□□ -1.54
DDC1Q08949 GPM3YOL056W 912 nt5.43□□□□□ -1.54
DDC1Q08949 OST3YOR085W 1053 nt5.43□□□□□ -1.54
DDC1Q08949 NOP2YNL061W 1857 nt5.43□□□□□ -1.54
DDC1Q08949 UTP9YHR196W 1728 nt5.43□□□□□ -1.54
DDC1Q08949 SSK22YCR073C 3996 nt5.42□□□□□ -1.54
DDC1Q08949 YAP1YML007W 1953 nt5.42□□□□□ -1.54
DDC1Q08949 YPT32YGL210W 669 nt5.42□□□□□ -1.54
DDC1Q08949 YLR296WYLR296W 327 nt5.42□□□□□ -1.54
DDC1Q08949 PGA2YNL149C 390 nt5.42□□□□□ -1.54
DDC1Q08949 HFI1YPL254W 1467 nt5.42□□□□□ -1.54
DDC1Q08949 HXT3YDR345C 1704 nt5.42□□□□□ -1.54
DDC1Q08949 CLP1YOR250C 1338 nt5.42□□□□□ -1.54
DDC1Q08949 IES1YFL013C 2079 nt5.41□□□□□ -1.54
DDC1Q08949 COQ6YGR255C 1440 nt5.41□□□□□ -1.54
DDC1Q08949 MTC1YJL123C 1437 nt5.41□□□□□ -1.54
DDC1Q08949 YDR401WYDR401W 564 nt5.41□□□□□ -1.54
DDC1Q08949 MND2YIR025W 1107 nt5.41□□□□□ -1.54
DDC1Q08949 SEC17YBL050W 879 nt5.41□□□□□ -1.54
DDC1Q08949 SER1YOR184W 1188 nt5.41□□□□□ -1.54
DDC1Q08949 RBA50YDR527W 1320 nt5.41□□□□□ -1.54
DDC1Q08949 MKK2YPL140C 1521 nt5.4□□□□□ -1.54
DDC1Q08949 CDC43YGL155W 1131 nt5.4□□□□□ -1.54
DDC1Q08949 ORM1YGR038W 669 nt5.4□□□□□ -1.54
DDC1Q08949 YAL056C-AYAL056C-A 351 nt5.4□□□□□ -1.54
DDC1Q08949 ENV9YOR246C 993 nt5.4□□□□□ -1.54
DDC1Q08949 RPO26YPR187W 468 nt5.4□□□□□ -1.54
DDC1Q08949 OPT1YJL212C 2400 nt5.4□□□□□ -1.55
DDC1Q08949 RET1YOR207C 3450 nt5.4□□□□□ -1.55
DDC1Q08949 AMA1YGR225W 1782 nt5.39□□□□□ -1.55
DDC1Q08949 ATG17YLR423C 1254 nt5.39□□□□□ -1.55
DDC1Q08949 REC114YMR133W 1287 nt5.39□□□□□ -1.55
DDC1Q08949 PDB1YBR221C 1101 nt5.39□□□□□ -1.55
DDC1Q08949 QDR1YIL120W 1692 nt5.39□□□□□ -1.55
DDC1Q08949 PTK2YJR059W 2457 nt5.39□□□□□ -1.55
DDC1Q08949 GAL10YBR019C 2100 nt5.39□□□□□ -1.55
DDC1Q08949 PDH1YPR002W 1551 nt5.38□□□□□ -1.55
DDC1Q08949 FOB1YDR110W 1701 nt5.38□□□□□ -1.55
DDC1Q08949 PDR16YNL231C 1056 nt5.38□□□□□ -1.55
DDC1Q08949 ATG20YDL113C 1923 nt5.38□□□□□ -1.55
DDC1Q08949 RAT1YOR048C 3021 nt5.38□□□□□ -1.55
DDC1Q08949 BUD14YAR014C 2130 nt5.38□□□□□ -1.55
DDC1Q08949 HEM3YDL205C 984 nt5.37□□□□□ -1.55
DDC1Q08949 GLO2YDR272W 825 nt5.37□□□□□ -1.55
DDC1Q08949 HOR7YMR251W-A 180 nt5.37□□□□□ -1.55
DDC1Q08949 snR32snR32 188 nt5.37□□□□□ -1.55
DDC1Q08949 DCC1YCL016C 1143 nt5.37□□□□□ -1.55
DDC1Q08949 NRM1YNR009W 750 nt5.36□□□□□ -1.55
DDC1Q08949 SMF3YLR034C 1422 nt5.36□□□□□ -1.55
DDC1Q08949 VAN1YML115C 1608 nt5.36□□□□□ -1.55
DDC1Q08949 TBF1YPL128C 1689 nt5.36□□□□□ -1.55
DDC1Q08949 AVT3YKL146W 2079 nt5.35□□□□□ -1.55
DDC1Q08949 APJ1YNL077W 1587 nt5.35□□□□□ -1.55
DDC1Q08949 BUD28YLR062C 378 nt5.35□□□□□ -1.55
DDC1Q08949 MAL11YGR289C 1851 nt5.34□□□□□ -1.55
DDC1Q08949 DBP9YLR276C 1785 nt5.34□□□□□ -1.55
DDC1Q08949 ALD6YPL061W 1503 nt5.34□□□□□ -1.55
DDC1Q08949 ENP1YBR247C 1452 nt5.34□□□□□ -1.55
DDC1Q08949 PHM8YER037W 966 nt5.34□□□□□ -1.55
DDC1Q08949 RPN12YFR052W 825 nt5.34□□□□□ -1.55
DDC1Q08949 tR(ACG)JtR(ACG)J 73 nt5.34□□□□□ -1.55
DDC1Q08949 YML101C-AYML101C-A 318 nt5.34□□□□□ -1.55
DDC1Q08949 YNL019CYNL019C 855 nt5.34□□□□□ -1.55
DDC1Q08949 YNL033WYNL033W 855 nt5.34□□□□□ -1.55
DDC1Q08949 LEM3YNL323W 1245 nt5.34□□□□□ -1.55
DDC1Q08949 KIP2YPL155C 2121 nt5.34□□□□□ -1.55
DDC1Q08949 RRP45YDR280W 918 nt5.33□□□□□ -1.56
DDC1Q08949 UTR4YEL038W 684 nt5.33□□□□□ -1.56
DDC1Q08949 NCS6YGL211W 1080 nt5.33□□□□□ -1.56
DDC1Q08949 PHO86YJL117W 936 nt5.33□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 23.4 ms