Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TMEM258P61165 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC14.19□□□□□ -0.14
TMEM258P61165 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM258P61165 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TMEM258P61165 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM258P61165 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM258P61165 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM258P61165 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TMEM258P61165 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM258P61165 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
TMEM258P61165 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC14.18□□□□□ -0.14
TMEM258P61165 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TMEM258P61165 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TMEM258P61165 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM258P61165 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM258P61165 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM258P61165 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM258P61165 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC14.18□□□□□ -0.14
TMEM258P61165 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM258P61165 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM258P61165 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM258P61165 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TMEM258P61165 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM258P61165 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM258P61165 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM258P61165 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM258P61165 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM258P61165 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM258P61165 LINC01124-201ENST00000409786 2117 ntBASIC14.17□□□□□ -0.14
TMEM258P61165 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM258P61165 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM258P61165 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM258P61165 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC14.17□□□□□ -0.14
TMEM258P61165 WHAMMP2-203ENST00000563942 1603 ntBASIC14.17□□□□□ -0.14
TMEM258P61165 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM258P61165 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.17□□□□□ -0.14
TMEM258P61165 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM258P61165 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TMEM258P61165 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM258P61165 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC14.17□□□□□ -0.14
TMEM258P61165 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TMEM258P61165 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TMEM258P61165 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM258P61165 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM258P61165 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM258P61165 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC14.16□□□□□ -0.14
TMEM258P61165 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM258P61165 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM258P61165 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM258P61165 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM258P61165 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM258P61165 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TMEM258P61165 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM258P61165 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TMEM258P61165 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM258P61165 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM258P61165 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.15□□□□□ -0.14
TMEM258P61165 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM258P61165 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM258P61165 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM258P61165 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.15□□□□□ -0.14
TMEM258P61165 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TMEM258P61165 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM258P61165 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM258P61165 AC127496.7-201ENST00000625110 1798 ntBASIC14.14□□□□□ -0.15
TMEM258P61165 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM258P61165 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM258P61165 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM258P61165 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM258P61165 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM258P61165 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM258P61165 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
TMEM258P61165 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TMEM258P61165 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
TMEM258P61165 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TMEM258P61165 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM258P61165 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM258P61165 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM258P61165 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM258P61165 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM258P61165 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM258P61165 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM258P61165 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM258P61165 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM258P61165 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM258P61165 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TMEM258P61165 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM258P61165 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM258P61165 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM258P61165 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TMEM258P61165 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TMEM258P61165 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM258P61165 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TMEM258P61165 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM258P61165 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM258P61165 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM258P61165 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TMEM258P61165 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TMEM258P61165 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
TMEM258P61165 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms