Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
GDNFP39905 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.23■□□□□ 0.83
GDNFP39905 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.23■□□□□ 0.83
GDNFP39905 MIR4449-201ENST00000578365 66 ntBASIC20.23■□□□□ 0.83
GDNFP39905 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDNFP39905 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
GDNFP39905 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GDNFP39905 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GDNFP39905 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.22■□□□□ 0.83
GDNFP39905 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDNFP39905 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
GDNFP39905 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDNFP39905 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDNFP39905 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GDNFP39905 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GDNFP39905 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
GDNFP39905 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GDNFP39905 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.21■□□□□ 0.83
GDNFP39905 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDNFP39905 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
GDNFP39905 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDNFP39905 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.21■□□□□ 0.83
GDNFP39905 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.21■□□□□ 0.83
GDNFP39905 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDNFP39905 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDNFP39905 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
GDNFP39905 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
GDNFP39905 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDNFP39905 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
GDNFP39905 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDNFP39905 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
GDNFP39905 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDNFP39905 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GDNFP39905 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDNFP39905 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.2■□□□□ 0.82
GDNFP39905 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.2■□□□□ 0.82
GDNFP39905 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDNFP39905 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
GDNFP39905 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
GDNFP39905 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDNFP39905 ABCB10P4-201ENST00000566803 2184 ntBASIC20.19■□□□□ 0.82
GDNFP39905 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GDNFP39905 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GDNFP39905 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GDNFP39905 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.19■□□□□ 0.82
GDNFP39905 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GDNFP39905 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GDNFP39905 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
GDNFP39905 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.18■□□□□ 0.82
GDNFP39905 AL359504.2-201ENST00000605506 1601 ntBASIC20.18■□□□□ 0.82
GDNFP39905 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDNFP39905 AC060814.1-201ENST00000554326 538 ntBASIC20.18■□□□□ 0.82
GDNFP39905 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GDNFP39905 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GDNFP39905 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GDNFP39905 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDNFP39905 AC126177.7-201ENST00000547904 679 ntBASIC20.17■□□□□ 0.82
GDNFP39905 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GDNFP39905 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GDNFP39905 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDNFP39905 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GDNFP39905 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
GDNFP39905 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.16■□□□□ 0.82
GDNFP39905 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDNFP39905 AL157400.5-201ENST00000507624 621 ntBASIC20.16■□□□□ 0.82
GDNFP39905 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDNFP39905 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GDNFP39905 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.16■□□□□ 0.82
GDNFP39905 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GDNFP39905 AL117328.2-201ENST00000624617 1940 ntBASIC20.15■□□□□ 0.82
GDNFP39905 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDNFP39905 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDNFP39905 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GDNFP39905 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.15■□□□□ 0.82
GDNFP39905 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
GDNFP39905 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.15■□□□□ 0.82
GDNFP39905 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDNFP39905 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDNFP39905 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
GDNFP39905 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
GDNFP39905 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GDNFP39905 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
GDNFP39905 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
GDNFP39905 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.14■□□□□ 0.81
GDNFP39905 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.14■□□□□ 0.81
GDNFP39905 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GDNFP39905 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GDNFP39905 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.13■□□□□ 0.81
GDNFP39905 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GDNFP39905 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GDNFP39905 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GDNFP39905 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
GDNFP39905 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
GDNFP39905 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
GDNFP39905 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.12■□□□□ 0.81
GDNFP39905 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.12■□□□□ 0.81
GDNFP39905 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
GDNFP39905 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GDNFP39905 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GDNFP39905 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms