Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.63■□□□□ 0.73
CXCL3P19876 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL3P19876 AL137060.1-201ENST00000618151 2648 ntBASIC19.63■□□□□ 0.73
CXCL3P19876 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CXCL3P19876 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CXCL3P19876 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.63■□□□□ 0.73
CXCL3P19876 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CXCL3P19876 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CXCL3P19876 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CXCL3P19876 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL3P19876 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL3P19876 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CXCL3P19876 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.62■□□□□ 0.73
CXCL3P19876 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.62■□□□□ 0.73
CXCL3P19876 AC097358.2-201ENST00000607541 1159 ntBASIC19.62■□□□□ 0.73
CXCL3P19876 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL3P19876 AC127496.7-201ENST00000625110 1798 ntBASIC19.62■□□□□ 0.73
CXCL3P19876 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL3P19876 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCL3P19876 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCL3P19876 AC110285.7-201ENST00000624417 1536 ntBASIC19.61■□□□□ 0.73
CXCL3P19876 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL3P19876 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL3P19876 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL3P19876 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL3P19876 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL3P19876 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL3P19876 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCL3P19876 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCL3P19876 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CXCL3P19876 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CXCL3P19876 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.59■□□□□ 0.73
CXCL3P19876 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CXCL3P19876 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.59■□□□□ 0.73
CXCL3P19876 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CXCL3P19876 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CXCL3P19876 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CXCL3P19876 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CXCL3P19876 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CXCL3P19876 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CXCL3P19876 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.58■□□□□ 0.73
CXCL3P19876 GUSBP5-202ENST00000510805 1989 ntBASIC19.58■□□□□ 0.73
CXCL3P19876 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.58■□□□□ 0.72
CXCL3P19876 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CXCL3P19876 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CXCL3P19876 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CXCL3P19876 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CXCL3P19876 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CXCL3P19876 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CXCL3P19876 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CXCL3P19876 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
CXCL3P19876 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CXCL3P19876 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CXCL3P19876 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CXCL3P19876 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CXCL3P19876 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CXCL3P19876 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CXCL3P19876 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CXCL3P19876 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.56■□□□□ 0.72
CXCL3P19876 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCL3P19876 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.56■□□□□ 0.72
CXCL3P19876 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CXCL3P19876 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CXCL3P19876 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CXCL3P19876 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CXCL3P19876 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCL3P19876 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCL3P19876 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCL3P19876 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCL3P19876 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCL3P19876 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.55■□□□□ 0.72
CXCL3P19876 FOXO3B-201ENST00000395675 1928 ntBASIC19.55■□□□□ 0.72
CXCL3P19876 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CXCL3P19876 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CXCL3P19876 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CXCL3P19876 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CXCL3P19876 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.55■□□□□ 0.72
CXCL3P19876 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.55■□□□□ 0.72
CXCL3P19876 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.54■□□□□ 0.72
CXCL3P19876 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CXCL3P19876 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
CXCL3P19876 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CXCL3P19876 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CXCL3P19876 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CXCL3P19876 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CXCL3P19876 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCL3P19876 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCL3P19876 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
CXCL3P19876 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCL3P19876 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CXCL3P19876 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCL3P19876 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CXCL3P19876 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CXCL3P19876 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CXCL3P19876 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CXCL3P19876 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.52■□□□□ 0.72
CXCL3P19876 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.52■□□□□ 0.72
CXCL3P19876 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
CXCL3P19876 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.52■□□□□ 0.72
CXCL3P19876 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms