Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 YLR154W-BYLR154W-B 165 nt5.04□□□□□ -1.6
RPL40BP0CH09 VTC2YFL004W 2487 nt5.04□□□□□ -1.6
RPL40BP0CH09 TEF1YPR080W 1377 nt5.04□□□□□ -1.6
RPL40BP0CH09 TEF2YBR118W 1377 nt5.04□□□□□ -1.6
RPL40BP0CH09 HSF1YGL073W 2502 nt5.03□□□□□ -1.6
RPL40BP0CH09 PKC1YBL105C 3456 nt5.03□□□□□ -1.6
RPL40BP0CH09 STE13YOR219C 2796 nt5.03□□□□□ -1.6
RPL40BP0CH09 MID1YNL291C 1647 nt5.03□□□□□ -1.6
RPL40BP0CH09 HAL5YJL165C 2568 nt5.03□□□□□ -1.6
RPL40BP0CH09 RFA1YAR007C 1866 nt5.03□□□□□ -1.6
RPL40BP0CH09 CLP1YOR250C 1338 nt5.02□□□□□ -1.61
RPL40BP0CH09 YNL217WYNL217W 981 nt5.02□□□□□ -1.61
RPL40BP0CH09 DIA3YDL024C 1407 nt5.02□□□□□ -1.61
RPL40BP0CH09 CTS2YDR371W 1536 nt5.02□□□□□ -1.61
RPL40BP0CH09 QDR3YBR043C 2070 nt5.01□□□□□ -1.61
RPL40BP0CH09 ATO3YDR384C 828 nt5.01□□□□□ -1.61
RPL40BP0CH09 HSP31YDR533C 714 nt5.01□□□□□ -1.61
RPL40BP0CH09 SUA5YGL169W 1281 nt5.01□□□□□ -1.61
RPL40BP0CH09 SCW4YGR279C 1161 nt5.01□□□□□ -1.61
RPL40BP0CH09 SSK1YLR006C 2139 nt5.01□□□□□ -1.61
RPL40BP0CH09 RHO2YNL090W 579 nt5.01□□□□□ -1.61
RPL40BP0CH09 YOL019W-AYOL019W-A 153 nt5.01□□□□□ -1.61
RPL40BP0CH09 TOM5YPR133W-A 153 nt5.01□□□□□ -1.61
RPL40BP0CH09 RRT2YBR246W 1164 nt5.01□□□□□ -1.61
RPL40BP0CH09 SMF2YHR050W 1650 nt5.01□□□□□ -1.61
RPL40BP0CH09 ARG8YOL140W 1272 nt5□□□□□ -1.61
RPL40BP0CH09 DCI1YOR180C 816 nt5□□□□□ -1.61
RPL40BP0CH09 MNN2YBR015C 1794 nt5□□□□□ -1.61
RPL40BP0CH09 YJL193WYJL193W 1209 nt4.99□□□□□ -1.61
RPL40BP0CH09 RPL14AYKL006W 417 nt4.99□□□□□ -1.61
RPL40BP0CH09 MRL1YPR079W 1146 nt4.99□□□□□ -1.61
RPL40BP0CH09 ROG3YFR022W 2202 nt4.99□□□□□ -1.61
RPL40BP0CH09 YML082WYML082W 1950 nt4.98□□□□□ -1.61
RPL40BP0CH09 SEC20YDR498C 1152 nt4.98□□□□□ -1.61
RPL40BP0CH09 YLF2YHL014C 1218 nt4.98□□□□□ -1.61
RPL40BP0CH09 STM1YLR150W 822 nt4.98□□□□□ -1.61
RPL40BP0CH09 HOR7YMR251W-A 180 nt4.98□□□□□ -1.61
RPL40BP0CH09 LDB19YOR322C 2457 nt4.98□□□□□ -1.61
RPL40BP0CH09 GYP1YOR070C 1914 nt4.97□□□□□ -1.61
RPL40BP0CH09 NUP116YMR047C 3342 nt4.97□□□□□ -1.61
RPL40BP0CH09 ACC1YNR016C 6702 nt4.97□□□□□ -1.61
RPL40BP0CH09 ATM1YMR301C 2073 nt4.97□□□□□ -1.61
RPL40BP0CH09 SNZ3YFL059W 897 nt4.97□□□□□ -1.61
RPL40BP0CH09 TYS1YGR185C 1185 nt4.97□□□□□ -1.61
RPL40BP0CH09 SNZ2YNL333W 897 nt4.97□□□□□ -1.61
RPL40BP0CH09 PSH1YOL054W 1221 nt4.97□□□□□ -1.61
RPL40BP0CH09 MKK1YOR231W 1527 nt4.97□□□□□ -1.61
RPL40BP0CH09 RPT1YKL145W 1404 nt4.97□□□□□ -1.61
RPL40BP0CH09 TRK2YKR050W 2670 nt4.96□□□□□ -1.62
RPL40BP0CH09 YDL032WYDL032W 312 nt4.96□□□□□ -1.62
RPL40BP0CH09 HEM3YDL205C 984 nt4.96□□□□□ -1.62
RPL40BP0CH09 KSS1YGR040W 1107 nt4.96□□□□□ -1.62
RPL40BP0CH09 RBD2YPL246C 789 nt4.96□□□□□ -1.62
RPL40BP0CH09 ACS2YLR153C 2052 nt4.96□□□□□ -1.62
RPL40BP0CH09 PRM1YNL279W 1986 nt4.96□□□□□ -1.62
RPL40BP0CH09 YHR045WYHR045W 1683 nt4.96□□□□□ -1.62
RPL40BP0CH09 HXT15YDL245C 1704 nt4.95□□□□□ -1.62
RPL40BP0CH09 HXT16YJR158W 1704 nt4.95□□□□□ -1.62
RPL40BP0CH09 SIA1YOR137C 1869 nt4.95□□□□□ -1.62
RPL40BP0CH09 YEL077CYEL077C 3834 nt4.95□□□□□ -1.62
RPL40BP0CH09 YJL171CYJL171C 1191 nt4.95□□□□□ -1.62
RPL40BP0CH09 MGM101YJR144W 810 nt4.95□□□□□ -1.62
RPL40BP0CH09 APN1YKL114C 1104 nt4.95□□□□□ -1.62
RPL40BP0CH09 DUR1,2YBR208C 5508 nt4.95□□□□□ -1.62
RPL40BP0CH09 ABZ1YNR033W 2364 nt4.95□□□□□ -1.62
RPL40BP0CH09 PDC1YLR044C 1692 nt4.95□□□□□ -1.62
RPL40BP0CH09 HPF1YOL155C 2904 nt4.94□□□□□ -1.62
RPL40BP0CH09 GFD1YMR255W 567 nt4.94□□□□□ -1.62
RPL40BP0CH09 SPS19YNL202W 879 nt4.94□□□□□ -1.62
RPL40BP0CH09 MRP51YPL118W 1035 nt4.94□□□□□ -1.62
RPL40BP0CH09 YPR098CYPR098C 486 nt4.94□□□□□ -1.62
RPL40BP0CH09 GEX1YCL073C 1848 nt4.94□□□□□ -1.62
RPL40BP0CH09 GEX2YKR106W 1848 nt4.94□□□□□ -1.62
RPL40BP0CH09 ASF2YDL197C 1578 nt4.94□□□□□ -1.62
RPL40BP0CH09 AIM10YER087W 1731 nt4.93□□□□□ -1.62
RPL40BP0CH09 MRF1YGL143C 1242 nt4.93□□□□□ -1.62
RPL40BP0CH09 HGH1YGR187C 1185 nt4.93□□□□□ -1.62
RPL40BP0CH09 IDP3YNL009W 1263 nt4.93□□□□□ -1.62
RPL40BP0CH09 snR19snR19 568 nt4.93□□□□□ -1.62
RPL40BP0CH09 LYS2YBR115C 4179 nt4.93□□□□□ -1.62
RPL40BP0CH09 RGT1YKL038W 3513 nt4.93□□□□□ -1.62
RPL40BP0CH09 CBK1YNL161W 2271 nt4.93□□□□□ -1.62
RPL40BP0CH09 UGO1YDR470C 1509 nt4.92□□□□□ -1.62
RPL40BP0CH09 BUL1YMR275C 2931 nt4.92□□□□□ -1.62
RPL40BP0CH09 MNN10YDR245W 1182 nt4.92□□□□□ -1.62
RPL40BP0CH09 YNR048WYNR048W 1182 nt4.92□□□□□ -1.62
RPL40BP0CH09 TAX4YJL083W 1815 nt4.92□□□□□ -1.62
RPL40BP0CH09 SRV2YNL138W 1581 nt4.91□□□□□ -1.62
RPL40BP0CH09 CST6YIL036W 1764 nt4.91□□□□□ -1.62
RPL40BP0CH09 MRPL20YKR085C 588 nt4.91□□□□□ -1.62
RPL40BP0CH09 GEP5YLR091W 882 nt4.91□□□□□ -1.62
RPL40BP0CH09 TIP41YPR040W 1071 nt4.91□□□□□ -1.62
RPL40BP0CH09 UBX2YML013W 1755 nt4.91□□□□□ -1.62
RPL40BP0CH09 GEP3YOR205C 1671 nt4.9□□□□□ -1.62
RPL40BP0CH09 UBA1YKL210W 3075 nt4.9□□□□□ -1.62
RPL40BP0CH09 GMH1YKR030W 822 nt4.9□□□□□ -1.63
RPL40BP0CH09 YAR019W-AYAR019W-A 333 nt4.9□□□□□ -1.63
RPL40BP0CH09 YIL067CYIL067C 2037 nt4.9□□□□□ -1.63
RPL40BP0CH09 SEC12YNR026C 1416 nt4.89□□□□□ -1.63
RPL40BP0CH09 VNX1YNL321W 2727 nt4.89□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 33.4 ms