Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 YLR154W-BYLR154W-B 165 nt5.04□□□□□ -1.6
RPL40AP0CH08 VTC2YFL004W 2487 nt5.04□□□□□ -1.6
RPL40AP0CH08 TEF1YPR080W 1377 nt5.04□□□□□ -1.6
RPL40AP0CH08 TEF2YBR118W 1377 nt5.04□□□□□ -1.6
RPL40AP0CH08 HSF1YGL073W 2502 nt5.03□□□□□ -1.6
RPL40AP0CH08 PKC1YBL105C 3456 nt5.03□□□□□ -1.6
RPL40AP0CH08 STE13YOR219C 2796 nt5.03□□□□□ -1.6
RPL40AP0CH08 MID1YNL291C 1647 nt5.03□□□□□ -1.6
RPL40AP0CH08 HAL5YJL165C 2568 nt5.03□□□□□ -1.6
RPL40AP0CH08 RFA1YAR007C 1866 nt5.03□□□□□ -1.6
RPL40AP0CH08 CLP1YOR250C 1338 nt5.02□□□□□ -1.61
RPL40AP0CH08 YNL217WYNL217W 981 nt5.02□□□□□ -1.61
RPL40AP0CH08 DIA3YDL024C 1407 nt5.02□□□□□ -1.61
RPL40AP0CH08 CTS2YDR371W 1536 nt5.02□□□□□ -1.61
RPL40AP0CH08 QDR3YBR043C 2070 nt5.01□□□□□ -1.61
RPL40AP0CH08 ATO3YDR384C 828 nt5.01□□□□□ -1.61
RPL40AP0CH08 HSP31YDR533C 714 nt5.01□□□□□ -1.61
RPL40AP0CH08 SUA5YGL169W 1281 nt5.01□□□□□ -1.61
RPL40AP0CH08 SCW4YGR279C 1161 nt5.01□□□□□ -1.61
RPL40AP0CH08 SSK1YLR006C 2139 nt5.01□□□□□ -1.61
RPL40AP0CH08 RHO2YNL090W 579 nt5.01□□□□□ -1.61
RPL40AP0CH08 YOL019W-AYOL019W-A 153 nt5.01□□□□□ -1.61
RPL40AP0CH08 TOM5YPR133W-A 153 nt5.01□□□□□ -1.61
RPL40AP0CH08 RRT2YBR246W 1164 nt5.01□□□□□ -1.61
RPL40AP0CH08 SMF2YHR050W 1650 nt5.01□□□□□ -1.61
RPL40AP0CH08 ARG8YOL140W 1272 nt5□□□□□ -1.61
RPL40AP0CH08 DCI1YOR180C 816 nt5□□□□□ -1.61
RPL40AP0CH08 MNN2YBR015C 1794 nt5□□□□□ -1.61
RPL40AP0CH08 YJL193WYJL193W 1209 nt4.99□□□□□ -1.61
RPL40AP0CH08 RPL14AYKL006W 417 nt4.99□□□□□ -1.61
RPL40AP0CH08 MRL1YPR079W 1146 nt4.99□□□□□ -1.61
RPL40AP0CH08 ROG3YFR022W 2202 nt4.99□□□□□ -1.61
RPL40AP0CH08 YML082WYML082W 1950 nt4.98□□□□□ -1.61
RPL40AP0CH08 SEC20YDR498C 1152 nt4.98□□□□□ -1.61
RPL40AP0CH08 YLF2YHL014C 1218 nt4.98□□□□□ -1.61
RPL40AP0CH08 STM1YLR150W 822 nt4.98□□□□□ -1.61
RPL40AP0CH08 HOR7YMR251W-A 180 nt4.98□□□□□ -1.61
RPL40AP0CH08 LDB19YOR322C 2457 nt4.98□□□□□ -1.61
RPL40AP0CH08 GYP1YOR070C 1914 nt4.97□□□□□ -1.61
RPL40AP0CH08 NUP116YMR047C 3342 nt4.97□□□□□ -1.61
RPL40AP0CH08 ACC1YNR016C 6702 nt4.97□□□□□ -1.61
RPL40AP0CH08 ATM1YMR301C 2073 nt4.97□□□□□ -1.61
RPL40AP0CH08 SNZ3YFL059W 897 nt4.97□□□□□ -1.61
RPL40AP0CH08 TYS1YGR185C 1185 nt4.97□□□□□ -1.61
RPL40AP0CH08 SNZ2YNL333W 897 nt4.97□□□□□ -1.61
RPL40AP0CH08 PSH1YOL054W 1221 nt4.97□□□□□ -1.61
RPL40AP0CH08 MKK1YOR231W 1527 nt4.97□□□□□ -1.61
RPL40AP0CH08 RPT1YKL145W 1404 nt4.97□□□□□ -1.61
RPL40AP0CH08 TRK2YKR050W 2670 nt4.96□□□□□ -1.62
RPL40AP0CH08 YDL032WYDL032W 312 nt4.96□□□□□ -1.62
RPL40AP0CH08 HEM3YDL205C 984 nt4.96□□□□□ -1.62
RPL40AP0CH08 KSS1YGR040W 1107 nt4.96□□□□□ -1.62
RPL40AP0CH08 RBD2YPL246C 789 nt4.96□□□□□ -1.62
RPL40AP0CH08 ACS2YLR153C 2052 nt4.96□□□□□ -1.62
RPL40AP0CH08 PRM1YNL279W 1986 nt4.96□□□□□ -1.62
RPL40AP0CH08 YHR045WYHR045W 1683 nt4.96□□□□□ -1.62
RPL40AP0CH08 HXT15YDL245C 1704 nt4.95□□□□□ -1.62
RPL40AP0CH08 HXT16YJR158W 1704 nt4.95□□□□□ -1.62
RPL40AP0CH08 SIA1YOR137C 1869 nt4.95□□□□□ -1.62
RPL40AP0CH08 YEL077CYEL077C 3834 nt4.95□□□□□ -1.62
RPL40AP0CH08 YJL171CYJL171C 1191 nt4.95□□□□□ -1.62
RPL40AP0CH08 MGM101YJR144W 810 nt4.95□□□□□ -1.62
RPL40AP0CH08 APN1YKL114C 1104 nt4.95□□□□□ -1.62
RPL40AP0CH08 DUR1,2YBR208C 5508 nt4.95□□□□□ -1.62
RPL40AP0CH08 ABZ1YNR033W 2364 nt4.95□□□□□ -1.62
RPL40AP0CH08 PDC1YLR044C 1692 nt4.95□□□□□ -1.62
RPL40AP0CH08 HPF1YOL155C 2904 nt4.94□□□□□ -1.62
RPL40AP0CH08 GFD1YMR255W 567 nt4.94□□□□□ -1.62
RPL40AP0CH08 SPS19YNL202W 879 nt4.94□□□□□ -1.62
RPL40AP0CH08 MRP51YPL118W 1035 nt4.94□□□□□ -1.62
RPL40AP0CH08 YPR098CYPR098C 486 nt4.94□□□□□ -1.62
RPL40AP0CH08 GEX1YCL073C 1848 nt4.94□□□□□ -1.62
RPL40AP0CH08 GEX2YKR106W 1848 nt4.94□□□□□ -1.62
RPL40AP0CH08 ASF2YDL197C 1578 nt4.94□□□□□ -1.62
RPL40AP0CH08 AIM10YER087W 1731 nt4.93□□□□□ -1.62
RPL40AP0CH08 MRF1YGL143C 1242 nt4.93□□□□□ -1.62
RPL40AP0CH08 HGH1YGR187C 1185 nt4.93□□□□□ -1.62
RPL40AP0CH08 IDP3YNL009W 1263 nt4.93□□□□□ -1.62
RPL40AP0CH08 snR19snR19 568 nt4.93□□□□□ -1.62
RPL40AP0CH08 LYS2YBR115C 4179 nt4.93□□□□□ -1.62
RPL40AP0CH08 RGT1YKL038W 3513 nt4.93□□□□□ -1.62
RPL40AP0CH08 CBK1YNL161W 2271 nt4.93□□□□□ -1.62
RPL40AP0CH08 UGO1YDR470C 1509 nt4.92□□□□□ -1.62
RPL40AP0CH08 BUL1YMR275C 2931 nt4.92□□□□□ -1.62
RPL40AP0CH08 MNN10YDR245W 1182 nt4.92□□□□□ -1.62
RPL40AP0CH08 YNR048WYNR048W 1182 nt4.92□□□□□ -1.62
RPL40AP0CH08 TAX4YJL083W 1815 nt4.92□□□□□ -1.62
RPL40AP0CH08 SRV2YNL138W 1581 nt4.91□□□□□ -1.62
RPL40AP0CH08 CST6YIL036W 1764 nt4.91□□□□□ -1.62
RPL40AP0CH08 MRPL20YKR085C 588 nt4.91□□□□□ -1.62
RPL40AP0CH08 GEP5YLR091W 882 nt4.91□□□□□ -1.62
RPL40AP0CH08 TIP41YPR040W 1071 nt4.91□□□□□ -1.62
RPL40AP0CH08 UBX2YML013W 1755 nt4.91□□□□□ -1.62
RPL40AP0CH08 GEP3YOR205C 1671 nt4.9□□□□□ -1.62
RPL40AP0CH08 UBA1YKL210W 3075 nt4.9□□□□□ -1.62
RPL40AP0CH08 GMH1YKR030W 822 nt4.9□□□□□ -1.63
RPL40AP0CH08 YAR019W-AYAR019W-A 333 nt4.9□□□□□ -1.63
RPL40AP0CH08 YIL067CYIL067C 2037 nt4.9□□□□□ -1.63
RPL40AP0CH08 SEC12YNR026C 1416 nt4.89□□□□□ -1.63
RPL40AP0CH08 VNX1YNL321W 2727 nt4.89□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 12.8 ms