Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC27.75■■■□□ 2.03
TMEM88BA6NKF7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TMEM88BA6NKF7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
TMEM88BA6NKF7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TMEM88BA6NKF7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
TMEM88BA6NKF7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TMEM88BA6NKF7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
TMEM88BA6NKF7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
TMEM88BA6NKF7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
TMEM88BA6NKF7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC27.74■■■□□ 2.03
TMEM88BA6NKF7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.74■■■□□ 2.03
TMEM88BA6NKF7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.74■■■□□ 2.03
TMEM88BA6NKF7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TMEM88BA6NKF7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
TMEM88BA6NKF7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TMEM88BA6NKF7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
TMEM88BA6NKF7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC27.73■■■□□ 2.03
TMEM88BA6NKF7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
TMEM88BA6NKF7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TMEM88BA6NKF7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TMEM88BA6NKF7 AC011298.3-201ENST00000615796 283 ntBASIC27.72■■■□□ 2.03
TMEM88BA6NKF7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
TMEM88BA6NKF7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC27.72■■■□□ 2.03
TMEM88BA6NKF7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.72■■■□□ 2.03
TMEM88BA6NKF7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
TMEM88BA6NKF7 ESRRAP2-201ENST00000418437 1549 ntBASIC27.72■■■□□ 2.03
TMEM88BA6NKF7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC27.72■■■□□ 2.03
TMEM88BA6NKF7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC27.71■■■□□ 2.03
TMEM88BA6NKF7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.71■■■□□ 2.03
TMEM88BA6NKF7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC27.71■■■□□ 2.03
TMEM88BA6NKF7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC27.71■■■□□ 2.03
TMEM88BA6NKF7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC27.71■■■□□ 2.03
TMEM88BA6NKF7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
TMEM88BA6NKF7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
TMEM88BA6NKF7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
TMEM88BA6NKF7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC27.7■■■□□ 2.02
TMEM88BA6NKF7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC27.7■■■□□ 2.02
TMEM88BA6NKF7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC27.7■■■□□ 2.02
TMEM88BA6NKF7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
TMEM88BA6NKF7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.7■■■□□ 2.02
TMEM88BA6NKF7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC27.69■■■□□ 2.02
TMEM88BA6NKF7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
TMEM88BA6NKF7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TMEM88BA6NKF7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.69■■■□□ 2.02
TMEM88BA6NKF7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
TMEM88BA6NKF7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
TMEM88BA6NKF7 PTCHD3P2-201ENST00000424937 1205 ntBASIC27.69■■■□□ 2.02
TMEM88BA6NKF7 AL138724.1-201ENST00000606771 1088 ntBASIC27.69■■■□□ 2.02
TMEM88BA6NKF7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.69■■■□□ 2.02
TMEM88BA6NKF7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.68■■■□□ 2.02
TMEM88BA6NKF7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
TMEM88BA6NKF7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
TMEM88BA6NKF7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
TMEM88BA6NKF7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
TMEM88BA6NKF7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
TMEM88BA6NKF7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC27.68■■■□□ 2.02
TMEM88BA6NKF7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
TMEM88BA6NKF7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.68■■■□□ 2.02
TMEM88BA6NKF7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TMEM88BA6NKF7 HLA-L-209ENST00000420110 1011 ntBASIC27.67■■■□□ 2.02
TMEM88BA6NKF7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC27.67■■■□□ 2.02
TMEM88BA6NKF7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27.67■■■□□ 2.02
TMEM88BA6NKF7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
TMEM88BA6NKF7 AL031602.1-201ENST00000633169 911 ntBASIC27.67■■■□□ 2.02
TMEM88BA6NKF7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC27.67■■■□□ 2.02
TMEM88BA6NKF7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TMEM88BA6NKF7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
TMEM88BA6NKF7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM88BA6NKF7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC27.66■■■□□ 2.02
TMEM88BA6NKF7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM88BA6NKF7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM88BA6NKF7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
TMEM88BA6NKF7 YBX1P1-201ENST00000445822 960 ntBASIC27.66■■■□□ 2.02
TMEM88BA6NKF7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.66■■■□□ 2.02
TMEM88BA6NKF7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.65■■■□□ 2.02
TMEM88BA6NKF7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TMEM88BA6NKF7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
TMEM88BA6NKF7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC27.65■■■□□ 2.02
TMEM88BA6NKF7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC27.65■■■□□ 2.02
TMEM88BA6NKF7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC27.65■■■□□ 2.02
TMEM88BA6NKF7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC27.65■■■□□ 2.02
TMEM88BA6NKF7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
TMEM88BA6NKF7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
TMEM88BA6NKF7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
TMEM88BA6NKF7 LBH-205ENST00000407930 756 ntTSL 2 BASIC27.64■■■□□ 2.02
TMEM88BA6NKF7 DUX4L2-201ENST00000561772 1275 ntBASIC27.64■■■□□ 2.02
TMEM88BA6NKF7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC27.64■■■□□ 2.02
TMEM88BA6NKF7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC27.64■■■□□ 2.02
TMEM88BA6NKF7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC27.64■■■□□ 2.02
TMEM88BA6NKF7 DUX4L6-201ENST00000626483 1275 ntBASIC27.64■■■□□ 2.02
TMEM88BA6NKF7 DUX4L1-201ENST00000627662 1275 ntBASIC27.64■■■□□ 2.02
TMEM88BA6NKF7 DUX4L8-201ENST00000629013 1275 ntBASIC27.64■■■□□ 2.02
TMEM88BA6NKF7 DUX4L3-201ENST00000630187 1275 ntBASIC27.64■■■□□ 2.02
TMEM88BA6NKF7 DUX4L7-201ENST00000630678 1275 ntBASIC27.64■■■□□ 2.02
TMEM88BA6NKF7 DUX4L5-201ENST00000630834 1275 ntBASIC27.64■■■□□ 2.02
TMEM88BA6NKF7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
TMEM88BA6NKF7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.01
TMEM88BA6NKF7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
TMEM88BA6NKF7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
TMEM88BA6NKF7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms