Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.56■■□□□ 1.04
SH3D21A4FU49 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SH3D21A4FU49 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3D21A4FU49 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SH3D21A4FU49 AL359504.2-201ENST00000605506 1601 ntBASIC21.55■■□□□ 1.04
SH3D21A4FU49 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3D21A4FU49 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3D21A4FU49 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3D21A4FU49 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SH3D21A4FU49 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3D21A4FU49 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SH3D21A4FU49 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.55■■□□□ 1.04
SH3D21A4FU49 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SH3D21A4FU49 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.54■■□□□ 1.04
SH3D21A4FU49 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3D21A4FU49 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3D21A4FU49 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3D21A4FU49 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3D21A4FU49 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3D21A4FU49 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3D21A4FU49 BHLHE23-202ENST00000612929 1109 ntBASIC21.54■■□□□ 1.04
SH3D21A4FU49 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3D21A4FU49 SLC6A10P-202ENST00000431994 2058 ntBASIC21.54■■□□□ 1.04
SH3D21A4FU49 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3D21A4FU49 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3D21A4FU49 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SH3D21A4FU49 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.53■■□□□ 1.04
SH3D21A4FU49 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.53■■□□□ 1.04
SH3D21A4FU49 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.53■■□□□ 1.04
SH3D21A4FU49 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.53■■□□□ 1.04
SH3D21A4FU49 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SH3D21A4FU49 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SH3D21A4FU49 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3D21A4FU49 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SH3D21A4FU49 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3D21A4FU49 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SH3D21A4FU49 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SH3D21A4FU49 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.52■■□□□ 1.04
SH3D21A4FU49 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3D21A4FU49 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SH3D21A4FU49 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
SH3D21A4FU49 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3D21A4FU49 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3D21A4FU49 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SH3D21A4FU49 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SH3D21A4FU49 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SH3D21A4FU49 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3D21A4FU49 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SH3D21A4FU49 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SH3D21A4FU49 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.5■■□□□ 1.03
SH3D21A4FU49 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SH3D21A4FU49 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3D21A4FU49 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.5■■□□□ 1.03
SH3D21A4FU49 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SH3D21A4FU49 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3D21A4FU49 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3D21A4FU49 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3D21A4FU49 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3D21A4FU49 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3D21A4FU49 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3D21A4FU49 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.49■■□□□ 1.03
SH3D21A4FU49 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
SH3D21A4FU49 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3D21A4FU49 SPCS2P3-201ENST00000500401 656 ntBASIC21.49■■□□□ 1.03
SH3D21A4FU49 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SH3D21A4FU49 MIR6765-201ENST00000614092 87 ntBASIC21.49■■□□□ 1.03
SH3D21A4FU49 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3D21A4FU49 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SH3D21A4FU49 DUSP8P5-201ENST00000422884 1815 ntBASIC21.48■■□□□ 1.03
SH3D21A4FU49 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SH3D21A4FU49 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.48■■□□□ 1.03
SH3D21A4FU49 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.48■■□□□ 1.03
SH3D21A4FU49 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SH3D21A4FU49 AC079834.2-201ENST00000609776 1949 ntBASIC21.48■■□□□ 1.03
SH3D21A4FU49 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SH3D21A4FU49 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.48■■□□□ 1.03
SH3D21A4FU49 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.48■■□□□ 1.03
SH3D21A4FU49 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SH3D21A4FU49 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SH3D21A4FU49 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.47■■□□□ 1.03
SH3D21A4FU49 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SH3D21A4FU49 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SH3D21A4FU49 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3D21A4FU49 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3D21A4FU49 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3D21A4FU49 AC139795.1-202ENST00000500444 432 ntBASIC21.47■■□□□ 1.03
SH3D21A4FU49 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3D21A4FU49 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.47■■□□□ 1.03
SH3D21A4FU49 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SH3D21A4FU49 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SH3D21A4FU49 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.47■■□□□ 1.03
SH3D21A4FU49 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3D21A4FU49 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3D21A4FU49 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3D21A4FU49 AC018755.3-202ENST00000596210 929 ntBASIC21.46■■□□□ 1.03
SH3D21A4FU49 AC074183.2-201ENST00000623112 922 ntBASIC21.46■■□□□ 1.03
SH3D21A4FU49 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3D21A4FU49 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SH3D21A4FU49 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SH3D21A4FU49 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms