Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 AC010491.1-201ENST00000563101 2797 ntBASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 AL353705.2-201ENST00000428243 662 ntBASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 CNN2P11-201ENST00000429351 262 ntBASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 AL139010.1-201ENST00000454878 894 ntBASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 AC093520.2-201ENST00000561830 333 ntBASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 SNHG9-202ENST00000564014 471 ntBASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 AC023511.2-201ENST00000618803 211 ntBASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 AC134684.3-201ENST00000641758 218 ntBASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 AC079781.4-201ENST00000641908 219 ntBASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
HLA-DRB4X5D2U9 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 RPS8P6-201ENST00000426177 609 ntBASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 FAM58DP-201ENST00000428076 619 ntBASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 RBPMS2P1-201ENST00000437762 623 ntBASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
HLA-DRB4X5D2U9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms