Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 BRI3BPP1-201ENST00000594224 787 ntBASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 BTNL10-201ENST00000595971 695 ntBASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 AC133552.6-201ENST00000613406 534 ntBASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 INTS4P2-202ENST00000614726 2019 ntBASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTDP1Q9Y5B0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 C1QBPP1-201ENST00000400117 770 ntBASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 AC022210.1-201ENST00000449856 793 ntBASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 ENPP7P5-201ENST00000541031 1031 ntBASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 PCDHA14-201ENST00000506751 2298 ntBASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTDP1Q9Y5B0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 KRT18P43-201ENST00000469825 1281 ntBASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 AC233724.13-201ENST00000598383 410 ntBASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 AC092364.2-201ENST00000596710 2692 ntBASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms