Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.77■□□□□ 0.28
CISHQ9NSE2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.77■□□□□ 0.28
CISHQ9NSE2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CISHQ9NSE2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CISHQ9NSE2 AL162727.3-201ENST00000635661 2787 ntBASIC16.77■□□□□ 0.28
CISHQ9NSE2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CISHQ9NSE2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CISHQ9NSE2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.77■□□□□ 0.28
CISHQ9NSE2 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.77■□□□□ 0.28
CISHQ9NSE2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.77■□□□□ 0.28
CISHQ9NSE2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CISHQ9NSE2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.77■□□□□ 0.28
CISHQ9NSE2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.77■□□□□ 0.28
CISHQ9NSE2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.77■□□□□ 0.28
CISHQ9NSE2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.77■□□□□ 0.28
CISHQ9NSE2 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CISHQ9NSE2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.77■□□□□ 0.27
CISHQ9NSE2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CISHQ9NSE2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CISHQ9NSE2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.77■□□□□ 0.27
CISHQ9NSE2 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CISHQ9NSE2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CISHQ9NSE2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CISHQ9NSE2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CISHQ9NSE2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CISHQ9NSE2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CISHQ9NSE2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CISHQ9NSE2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CISHQ9NSE2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CISHQ9NSE2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CISHQ9NSE2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.77■□□□□ 0.27
CISHQ9NSE2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
CISHQ9NSE2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CISHQ9NSE2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 HMGN1P19-201ENST00000436976 333 ntBASIC16.76■□□□□ 0.27
CISHQ9NSE2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 TSPY16P-201ENST00000449843 468 ntBASIC16.76■□□□□ 0.27
CISHQ9NSE2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 MEIS3P1-201ENST00000495167 958 ntBASIC16.76■□□□□ 0.27
CISHQ9NSE2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.76■□□□□ 0.27
CISHQ9NSE2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CISHQ9NSE2 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 AC138969.3-201ENST00000546612 1459 ntBASIC16.75■□□□□ 0.27
CISHQ9NSE2 AC138932.2-201ENST00000548268 1459 ntBASIC16.75■□□□□ 0.27
CISHQ9NSE2 AC126755.4-201ENST00000549796 1459 ntBASIC16.75■□□□□ 0.27
CISHQ9NSE2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms