Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.66■□□□□ 0.26
CD248Q9HCU0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.66■□□□□ 0.26
CD248Q9HCU0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 GAPDHP21-201ENST00000450301 1010 ntBASIC16.66■□□□□ 0.26
CD248Q9HCU0 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.66■□□□□ 0.26
CD248Q9HCU0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CD248Q9HCU0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.66■□□□□ 0.26
CD248Q9HCU0 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.66■□□□□ 0.26
CD248Q9HCU0 AC022144.1-201ENST00000602255 1580 ntBASIC16.66■□□□□ 0.26
CD248Q9HCU0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.66■□□□□ 0.26
CD248Q9HCU0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.66■□□□□ 0.26
CD248Q9HCU0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 AC063926.2-201ENST00000623766 1308 ntBASIC16.66■□□□□ 0.26
CD248Q9HCU0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.66■□□□□ 0.26
CD248Q9HCU0 AL137784.3-201ENST00000623858 2288 ntBASIC16.66■□□□□ 0.26
CD248Q9HCU0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD248Q9HCU0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 HLA-A-202ENST00000376806 1854 ntBASIC16.65■□□□□ 0.26
CD248Q9HCU0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.65■□□□□ 0.26
CD248Q9HCU0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 SPTLC1P1-201ENST00000447199 261 ntBASIC16.65■□□□□ 0.26
CD248Q9HCU0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.65■□□□□ 0.26
CD248Q9HCU0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 AC009407.1-201ENST00000568958 598 ntBASIC16.65■□□□□ 0.26
CD248Q9HCU0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 SPTSSB-204ENST00000617024 1292 ntBASIC16.65■□□□□ 0.26
CD248Q9HCU0 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CD248Q9HCU0 AC023157.3-201ENST00000619086 2088 ntBASIC16.65■□□□□ 0.26
CD248Q9HCU0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD248Q9HCU0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
CD248Q9HCU0 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CD248Q9HCU0 AL603832.2-201ENST00000566195 2125 ntBASIC16.64■□□□□ 0.25
CD248Q9HCU0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 KRT8P39-201ENST00000396270 1433 ntBASIC16.64■□□□□ 0.25
CD248Q9HCU0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 AL844908.2-201ENST00000609461 460 ntBASIC16.64■□□□□ 0.25
CD248Q9HCU0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 TEX28P1-201ENST00000613479 1221 ntBASIC16.64■□□□□ 0.25
CD248Q9HCU0 TEX28P2-201ENST00000617764 1221 ntBASIC16.64■□□□□ 0.25
CD248Q9HCU0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.64■□□□□ 0.25
CD248Q9HCU0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD248Q9HCU0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms