Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 HLA-H-201ENST00000383620 1096 ntBASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 KRT18P3-201ENST00000451602 1288 ntBASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 AL139010.1-201ENST00000454878 894 ntBASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR2J3Q9H1A7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 CICP24-201ENST00000605464 2705 ntBASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 MIR346-201ENST00000362234 95 ntBASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 AL590627.1-203ENST00000421194 1026 ntBASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 AL645939.2-201ENST00000427340 991 ntBASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 RNA5SP410-201ENST00000516285 106 ntBASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 AC106730.1-201ENST00000566722 1090 ntBASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 AC091812.2-201ENST00000619081 385 ntBASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 AL009178.2-201ENST00000597278 2719 ntBASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR2J3Q9H1A7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
POLR2J3Q9H1A7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms