Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ABCA3Q99758 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.35■□□□□ 0.85
ABCA3Q99758 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ABCA3Q99758 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ABCA3Q99758 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ABCA3Q99758 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ABCA3Q99758 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ABCA3Q99758 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ABCA3Q99758 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ABCA3Q99758 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ABCA3Q99758 AC120498.9-201ENST00000339021 3867 ntBASIC20.35■□□□□ 0.85
ABCA3Q99758 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ABCA3Q99758 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC20.35■□□□□ 0.85
ABCA3Q99758 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC20.35■□□□□ 0.85
ABCA3Q99758 AC097065.1-201ENST00000425737 517 ntBASIC20.35■□□□□ 0.85
ABCA3Q99758 RPL35-206ENST00000629845 340 ntTSL 5 BASIC20.35■□□□□ 0.85
ABCA3Q99758 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ABCA3Q99758 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ABCA3Q99758 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ABCA3Q99758 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ABCA3Q99758 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ABCA3Q99758 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ABCA3Q99758 AC018695.7-201ENST00000624587 2492 ntBASIC20.34■□□□□ 0.85
ABCA3Q99758 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ABCA3Q99758 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.34■□□□□ 0.85
ABCA3Q99758 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
ABCA3Q99758 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.34■□□□□ 0.85
ABCA3Q99758 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ABCA3Q99758 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ABCA3Q99758 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC20.34■□□□□ 0.85
ABCA3Q99758 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ABCA3Q99758 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ABCA3Q99758 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC20.34■□□□□ 0.85
ABCA3Q99758 RPL18AP3-201ENST00000462885 528 ntBASIC20.34■□□□□ 0.85
ABCA3Q99758 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC20.34■□□□□ 0.85
ABCA3Q99758 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC20.34■□□□□ 0.85
ABCA3Q99758 FOS-204ENST00000554617 796 ntTSL 2 BASIC20.34■□□□□ 0.85
ABCA3Q99758 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC20.34■□□□□ 0.85
ABCA3Q99758 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC20.34■□□□□ 0.85
ABCA3Q99758 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC20.34■□□□□ 0.85
ABCA3Q99758 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ABCA3Q99758 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ABCA3Q99758 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ABCA3Q99758 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ABCA3Q99758 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ABCA3Q99758 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ABCA3Q99758 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ABCA3Q99758 AC074138.1-201ENST00000611182 1303 ntBASIC20.33■□□□□ 0.85
ABCA3Q99758 AC078875.1-201ENST00000431907 724 ntBASIC20.33■□□□□ 0.85
ABCA3Q99758 KLF2P1-201ENST00000447438 1042 ntBASIC20.33■□□□□ 0.85
ABCA3Q99758 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC20.33■□□□□ 0.85
ABCA3Q99758 GMFG-209ENST00000600322 622 ntTSL 5 BASIC20.33■□□□□ 0.85
ABCA3Q99758 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ABCA3Q99758 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ABCA3Q99758 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ABCA3Q99758 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
ABCA3Q99758 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ABCA3Q99758 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ABCA3Q99758 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ABCA3Q99758 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ABCA3Q99758 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ABCA3Q99758 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.33■□□□□ 0.85
ABCA3Q99758 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ABCA3Q99758 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ABCA3Q99758 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ABCA3Q99758 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC20.33■□□□□ 0.84
ABCA3Q99758 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC20.33■□□□□ 0.84
ABCA3Q99758 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ABCA3Q99758 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC20.33■□□□□ 0.84
ABCA3Q99758 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC20.33■□□□□ 0.84
ABCA3Q99758 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ABCA3Q99758 AL109837.1-201ENST00000603272 613 ntBASIC20.33■□□□□ 0.84
ABCA3Q99758 AC005618.3-201ENST00000624928 458 ntBASIC20.33■□□□□ 0.84
ABCA3Q99758 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.33■□□□□ 0.84
ABCA3Q99758 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ABCA3Q99758 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ABCA3Q99758 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ABCA3Q99758 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ABCA3Q99758 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ABCA3Q99758 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ABCA3Q99758 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC20.32■□□□□ 0.84
ABCA3Q99758 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ABCA3Q99758 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ABCA3Q99758 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.32■□□□□ 0.84
ABCA3Q99758 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
ABCA3Q99758 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ABCA3Q99758 INE2-201ENST00000630399 1874 ntBASIC20.32■□□□□ 0.84
ABCA3Q99758 FKBP4P6-201ENST00000457486 1332 ntBASIC20.32■□□□□ 0.84
ABCA3Q99758 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC20.32■□□□□ 0.84
ABCA3Q99758 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ABCA3Q99758 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ABCA3Q99758 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ABCA3Q99758 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ABCA3Q99758 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC20.32■□□□□ 0.84
ABCA3Q99758 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC20.32■□□□□ 0.84
ABCA3Q99758 RN7SL163P-201ENST00000583100 276 ntBASIC20.32■□□□□ 0.84
ABCA3Q99758 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ABCA3Q99758 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ABCA3Q99758 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC20.32■□□□□ 0.84
ABCA3Q99758 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms