Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC4.63□□□□□ -1.67
HMCN1Q96RW7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
HMCN1Q96RW7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC4.63□□□□□ -1.67
HMCN1Q96RW7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
HMCN1Q96RW7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMCN1Q96RW7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMCN1Q96RW7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 NAT9-204ENST00000578822 839 ntTSL 3 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AC010976.2-201ENST00000609697 852 ntBASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AL008638.4-201ENST00000624792 1315 ntBASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 KRT18P37-201ENST00000520711 1282 ntBASIC4.62□□□□□ -1.67
HMCN1Q96RW7 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 SIGLEC18P-201ENST00000602271 909 ntBASIC4.62□□□□□ -1.67
HMCN1Q96RW7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 SOD1-202ENST00000389995 865 ntTSL 3 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 VDAC1P1-201ENST00000439229 848 ntBASIC4.62□□□□□ -1.67
HMCN1Q96RW7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 RPS15P5-201ENST00000449885 432 ntBASIC4.62□□□□□ -1.67
HMCN1Q96RW7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 PPY-202ENST00000587006 431 ntTSL 3 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC4.62□□□□□ -1.67
HMCN1Q96RW7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 KLF2P1-201ENST00000447438 1042 ntBASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 MT2A-202ENST00000561491 581 ntTSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 MIA-RAB4B-201ENST00000600729 1229 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AC009884.2-201ENST00000603110 324 ntBASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AC022001.3-201ENST00000606330 596 ntBASIC4.62□□□□□ -1.67
HMCN1Q96RW7 AL136295.7-201ENST00000619226 1200 ntBASIC4.62□□□□□ -1.67
HMCN1Q96RW7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMCN1Q96RW7 BNIP3P1-202ENST00000550043 1585 ntBASIC4.62□□□□□ -1.67
HMCN1Q96RW7 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms