Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC138761.1-201ENST00000584393 385 ntBASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 AC067930.6-201ENST00000623257 4947 ntBASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 AC105917.1-201ENST00000506637 2539 ntBASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PTCHD1Q96NR3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 HNRNPUP1-201ENST00000554987 333 ntBASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.88□□□□□ -0.03
PTCHD1Q96NR3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.87□□□□□ -0.03
PTCHD1Q96NR3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms