Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PCDHB19P-201ENST00000570871 2371 ntBASIC16.96■□□□□ 0.31
LRCH3Q96II8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 AL008707.1-201ENST00000422498 534 ntBASIC16.96■□□□□ 0.31
LRCH3Q96II8 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 NOC2LP1-201ENST00000450578 752 ntBASIC16.96■□□□□ 0.31
LRCH3Q96II8 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 RNA5SP486-201ENST00000515961 83 ntBASIC16.96■□□□□ 0.31
LRCH3Q96II8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH3Q96II8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH3Q96II8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
LRCH3Q96II8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
LRCH3Q96II8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRCH3Q96II8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRCH3Q96II8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.96■□□□□ 0.3
LRCH3Q96II8 AC060834.1-201ENST00000443027 2032 ntBASIC16.96■□□□□ 0.3
LRCH3Q96II8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRCH3Q96II8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.96■□□□□ 0.3
LRCH3Q96II8 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRCH3Q96II8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
LRCH3Q96II8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 PKD1P1-201ENST00000458669 6805 ntBASIC16.95■□□□□ 0.3
LRCH3Q96II8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 AC022217.1-201ENST00000521069 738 ntBASIC16.95■□□□□ 0.3
LRCH3Q96II8 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 AL645939.5-201ENST00000606834 243 ntBASIC16.95■□□□□ 0.3
LRCH3Q96II8 AC025181.2-201ENST00000606994 802 ntBASIC16.95■□□□□ 0.3
LRCH3Q96II8 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 AC132938.4-201ENST00000623835 848 ntBASIC16.95■□□□□ 0.3
LRCH3Q96II8 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 AC022726.2-201ENST00000634673 547 ntBASIC16.95■□□□□ 0.3
LRCH3Q96II8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 AC008894.3-201ENST00000624324 3103 ntBASIC16.95■□□□□ 0.3
LRCH3Q96II8 AL023775.1-201ENST00000454907 1746 ntBASIC16.95■□□□□ 0.3
LRCH3Q96II8 AC025271.4-201ENST00000621477 1726 ntBASIC16.95■□□□□ 0.3
LRCH3Q96II8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 PCDHA14-201ENST00000506751 2298 ntBASIC16.95■□□□□ 0.3
LRCH3Q96II8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LRCH3Q96II8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH3Q96II8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
LRCH3Q96II8 PCDH8P1-201ENST00000428983 2773 ntBASIC16.94■□□□□ 0.3
LRCH3Q96II8 AC105020.1-201ENST00000435356 2205 ntBASIC16.94■□□□□ 0.3
LRCH3Q96II8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH3Q96II8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms