Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
DDX11Q96FC9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DDX11Q96FC9 AC013268.4-201ENST00000637413 2228 ntBASIC18.76■□□□□ 0.59
DDX11Q96FC9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 AC011477.6-201ENST00000604980 1927 ntBASIC18.75■□□□□ 0.59
DDX11Q96FC9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 AC009407.1-201ENST00000568958 598 ntBASIC18.75■□□□□ 0.59
DDX11Q96FC9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 AP001282.1-201ENST00000531301 1499 ntBASIC18.75■□□□□ 0.59
DDX11Q96FC9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.75■□□□□ 0.59
DDX11Q96FC9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DDX11Q96FC9 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX11Q96FC9 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX11Q96FC9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX11Q96FC9 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX11Q96FC9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX11Q96FC9 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 RN7SL692P-201ENST00000464677 288 ntBASIC18.74■□□□□ 0.59
DDX11Q96FC9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 BANF1P1-201ENST00000553684 263 ntBASIC18.74■□□□□ 0.59
DDX11Q96FC9 AL079307.3-201ENST00000556114 283 ntBASIC18.74■□□□□ 0.59
DDX11Q96FC9 AL596325.1-201ENST00000563991 1082 ntBASIC18.74■□□□□ 0.59
DDX11Q96FC9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 AC024267.1-201ENST00000582320 895 ntBASIC18.74■□□□□ 0.59
DDX11Q96FC9 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DDX11Q96FC9 AC008738.7-201ENST00000609744 511 ntBASIC18.74■□□□□ 0.59
DDX11Q96FC9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
DDX11Q96FC9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX11Q96FC9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX11Q96FC9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX11Q96FC9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX11Q96FC9 AL136982.4-201ENST00000437689 1740 ntBASIC18.74■□□□□ 0.59
DDX11Q96FC9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.74■□□□□ 0.59
DDX11Q96FC9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX11Q96FC9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
DDX11Q96FC9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX11Q96FC9 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
DDX11Q96FC9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
DDX11Q96FC9 AC092127.1-201ENST00000567093 3455 ntBASIC18.73■□□□□ 0.59
DDX11Q96FC9 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
DDX11Q96FC9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms