Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 FZD10-202ENST00000539839 3282 ntBASIC16.87■□□□□ 0.29
TRIM43Q96BQ3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 AC011742.3-201ENST00000439053 820 ntBASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 CHMP1AP1-201ENST00000445563 662 ntBASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 AC234782.1-201ENST00000451950 919 ntBASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 AL391280.1-201ENST00000506969 1062 ntBASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 AL161670.2-201ENST00000557650 1227 ntBASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 ZACNP1-201ENST00000612259 710 ntBASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM43Q96BQ3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 AL139094.1-201ENST00000405549 1188 ntBASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 AC073352.2-201ENST00000609385 439 ntBASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 HLA-C-210ENST00000640219 976 ntBASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 KRT8P29-201ENST00000420409 1371 ntBASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM43Q96BQ3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.84■□□□□ 0.29
TRIM43Q96BQ3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms