Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
HPS3Q969F9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HPS3Q969F9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.38
HPS3Q969F9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HPS3Q969F9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.46■□□□□ 0.38
HPS3Q969F9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
HPS3Q969F9 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HPS3Q969F9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HPS3Q969F9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HPS3Q969F9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HPS3Q969F9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.45■□□□□ 0.38
HPS3Q969F9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HPS3Q969F9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.45■□□□□ 0.38
HPS3Q969F9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.45■□□□□ 0.38
HPS3Q969F9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
HPS3Q969F9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.45■□□□□ 0.38
HPS3Q969F9 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.45■□□□□ 0.38
HPS3Q969F9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS3Q969F9 AC092183.1-201ENST00000469884 875 ntBASIC17.45■□□□□ 0.38
HPS3Q969F9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.45■□□□□ 0.38
HPS3Q969F9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS3Q969F9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.45■□□□□ 0.38
HPS3Q969F9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.45■□□□□ 0.38
HPS3Q969F9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.45■□□□□ 0.38
HPS3Q969F9 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 AL390955.2-201ENST00000603032 514 ntBASIC17.45■□□□□ 0.38
HPS3Q969F9 AL844908.2-201ENST00000609461 460 ntBASIC17.45■□□□□ 0.38
HPS3Q969F9 AC093512.1-201ENST00000617969 520 ntBASIC17.45■□□□□ 0.38
HPS3Q969F9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.45■□□□□ 0.38
HPS3Q969F9 AL109936.8-201ENST00000641772 604 ntBASIC17.45■□□□□ 0.38
HPS3Q969F9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS3Q969F9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS3Q969F9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.45■□□□□ 0.38
HPS3Q969F9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.45■□□□□ 0.38
HPS3Q969F9 AC100757.3-201ENST00000622361 1406 ntBASIC17.45■□□□□ 0.38
HPS3Q969F9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 AC103702.1-201ENST00000548801 2630 ntBASIC17.45■□□□□ 0.38
HPS3Q969F9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.45■□□□□ 0.38
HPS3Q969F9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
HPS3Q969F9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
HPS3Q969F9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HPS3Q969F9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HPS3Q969F9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.44■□□□□ 0.38
HPS3Q969F9 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HPS3Q969F9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HPS3Q969F9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.44■□□□□ 0.38
HPS3Q969F9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
HPS3Q969F9 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.44■□□□□ 0.38
HPS3Q969F9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.44■□□□□ 0.38
HPS3Q969F9 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HPS3Q969F9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HPS3Q969F9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HPS3Q969F9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.44■□□□□ 0.38
HPS3Q969F9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.44■□□□□ 0.38
HPS3Q969F9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.44■□□□□ 0.38
HPS3Q969F9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.44■□□□□ 0.38
HPS3Q969F9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.44■□□□□ 0.38
HPS3Q969F9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.44■□□□□ 0.38
HPS3Q969F9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.44■□□□□ 0.38
HPS3Q969F9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.44■□□□□ 0.38
HPS3Q969F9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 AC044860.1-202ENST00000559481 777 ntBASIC17.44■□□□□ 0.38
HPS3Q969F9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.44■□□□□ 0.38
HPS3Q969F9 MIR6069-201ENST00000620069 79 ntBASIC17.44■□□□□ 0.38
HPS3Q969F9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HPS3Q969F9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms