Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.95■□□□□ 0.46
ERCC4Q92889 AC091812.2-201ENST00000619081 385 ntBASIC17.95■□□□□ 0.46
ERCC4Q92889 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
ERCC4Q92889 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC4Q92889 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC4Q92889 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.95■□□□□ 0.46
ERCC4Q92889 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ERCC4Q92889 C8orf49-201ENST00000525043 1968 ntBASIC17.95■□□□□ 0.46
ERCC4Q92889 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.95■□□□□ 0.46
ERCC4Q92889 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC4Q92889 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.95■□□□□ 0.46
ERCC4Q92889 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ERCC4Q92889 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.94■□□□□ 0.46
ERCC4Q92889 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
ERCC4Q92889 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.94■□□□□ 0.46
ERCC4Q92889 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.94■□□□□ 0.46
ERCC4Q92889 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
ERCC4Q92889 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC4Q92889 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.94■□□□□ 0.46
ERCC4Q92889 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC4Q92889 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC4Q92889 AC127383.1-201ENST00000444697 1800 ntBASIC17.94■□□□□ 0.46
ERCC4Q92889 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ERCC4Q92889 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.94■□□□□ 0.46
ERCC4Q92889 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC4Q92889 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC4Q92889 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 AC098859.1-201ENST00000502915 1238 ntBASIC17.94■□□□□ 0.46
ERCC4Q92889 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.94■□□□□ 0.46
ERCC4Q92889 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.94■□□□□ 0.46
ERCC4Q92889 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.94■□□□□ 0.46
ERCC4Q92889 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.94■□□□□ 0.46
ERCC4Q92889 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.94■□□□□ 0.46
ERCC4Q92889 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.94■□□□□ 0.46
ERCC4Q92889 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC4Q92889 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.94■□□□□ 0.46
ERCC4Q92889 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ERCC4Q92889 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 LINC00528-201ENST00000600723 2160 ntBASIC17.94■□□□□ 0.46
ERCC4Q92889 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC4Q92889 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC4Q92889 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ERCC4Q92889 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
ERCC4Q92889 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
ERCC4Q92889 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC4Q92889 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC4Q92889 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC4Q92889 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC4Q92889 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 AL355306.1-201ENST00000415580 579 ntBASIC17.93■□□□□ 0.46
ERCC4Q92889 AC142381.1-201ENST00000426099 345 ntBASIC17.93■□□□□ 0.46
ERCC4Q92889 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.93■□□□□ 0.46
ERCC4Q92889 KRT18P3-201ENST00000451602 1288 ntBASIC17.93■□□□□ 0.46
ERCC4Q92889 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.93■□□□□ 0.46
ERCC4Q92889 AC112191.1-201ENST00000523689 701 ntBASIC17.93■□□□□ 0.46
ERCC4Q92889 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
ERCC4Q92889 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.93■□□□□ 0.46
ERCC4Q92889 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.93■□□□□ 0.46
ERCC4Q92889 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.93■□□□□ 0.46
ERCC4Q92889 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.93■□□□□ 0.46
ERCC4Q92889 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 AC120114.3-201ENST00000611923 658 ntBASIC17.93■□□□□ 0.46
ERCC4Q92889 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
ERCC4Q92889 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.93■□□□□ 0.46
ERCC4Q92889 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC4Q92889 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
ERCC4Q92889 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC4Q92889 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC4Q92889 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms