Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.94□□□□□ -0.02
TM9SF4Q92544 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 KRT8P12-202ENST00000472924 1397 ntBASIC14.94□□□□□ -0.02
TM9SF4Q92544 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TM9SF4Q92544 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 AP005117.1-202ENST00000581724 1908 ntBASIC14.94□□□□□ -0.02
TM9SF4Q92544 LINC02228-204ENST00000642115 2962 ntBASIC14.94□□□□□ -0.02
TM9SF4Q92544 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TM9SF4Q92544 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 GIMAP3P-201ENST00000495150 836 ntBASIC14.93□□□□□ -0.02
TM9SF4Q92544 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 AC010336.2-201ENST00000564226 506 ntBASIC14.93□□□□□ -0.02
TM9SF4Q92544 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 AL033527.5-202ENST00000641632 1098 ntBASIC14.93□□□□□ -0.02
TM9SF4Q92544 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TM9SF4Q92544 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 SNX33P1-201ENST00000592116 1762 ntBASIC14.93□□□□□ -0.02
TM9SF4Q92544 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.93□□□□□ -0.02
TM9SF4Q92544 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 AC114501.2-201ENST00000439631 535 ntBASIC14.92□□□□□ -0.02
TM9SF4Q92544 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.92□□□□□ -0.02
TM9SF4Q92544 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TM9SF4Q92544 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.92□□□□□ -0.02
TM9SF4Q92544 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms