Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 BX842568.4-201ENST00000421222 227 ntBASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 RPS8P6-201ENST00000426177 609 ntBASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 AP000344.2-201ENST00000512987 629 ntBASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 SLC25A39P2-201ENST00000537614 270 ntBASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 AC022145.2-201ENST00000598203 171 ntBASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 AC134407.2-201ENST00000625089 1978 ntBASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 AC023157.3-201ENST00000619086 2088 ntBASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CSNK2A3Q8NEV1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 AP3S2-216ENST00000617003 1561 ntBASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 KRT18P32-201ENST00000424695 1287 ntBASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 RARRES2P9-201ENST00000565168 469 ntBASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 MIR4469-201ENST00000583919 79 ntBASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 AL513210.1-201ENST00000629608 234 ntBASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 LINC02228-204ENST00000642115 2962 ntBASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CSNK2A3Q8NEV1 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms