Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 AC009477.1-201ENST00000452936 217 ntBASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 AL138918.1-201ENST00000568306 659 ntBASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 AC005622.1-201ENST00000636801 1703 ntBASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CCDC105Q8IYK2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 HLA-V-204ENST00000476601 1289 ntBASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 RARRES2P9-201ENST00000565168 469 ntBASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 AC007967.4-201ENST00000614700 386 ntBASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC105Q8IYK2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 MIR658-201ENST00000385210 100 ntBASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 AL512384.1-201ENST00000406683 331 ntBASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 AC142381.1-201ENST00000426099 345 ntBASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 AC003101.2-201ENST00000612557 442 ntBASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC105Q8IYK2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms