Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.22■□□□□ 0.19
NPAS3Q8IXF0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 GAPDHP40-201ENST00000505218 1006 ntBASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 AC023310.1-201ENST00000554836 735 ntBASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 AC068587.10-201ENST00000641210 219 ntBASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NPAS3Q8IXF0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPAS3Q8IXF0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
NPAS3Q8IXF0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPAS3Q8IXF0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
NPAS3Q8IXF0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPAS3Q8IXF0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NPAS3Q8IXF0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 AC006001.1-201ENST00000325130 474 ntBASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 MIR648-201ENST00000385046 94 ntBASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 FAM197Y7-201ENST00000432892 766 ntBASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 AP005019.2-201ENST00000615104 511 ntBASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 AC138951.2-201ENST00000623455 1161 ntBASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 AL139099.5-201ENST00000635274 300 ntBASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
NPAS3Q8IXF0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
NPAS3Q8IXF0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms