Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC50Q8IVM0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 AC061975.2-201ENST00000581722 295 ntBASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 AC018892.3-201ENST00000623986 2499 ntBASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC50Q8IVM0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 FOXO1B-201ENST00000504678 1527 ntBASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 AC005089.1-201ENST00000619486 2241 ntBASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 AC008267.7-201ENST00000624570 1194 ntBASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 AC026748.1-201ENST00000624349 3251 ntBASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC50Q8IVM0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC50Q8IVM0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms