Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 AC004987.2-201ENST00000395959 1148 ntBASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 AC098859.1-201ENST00000502915 1238 ntBASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 UNC93B6-202ENST00000528242 690 ntBASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 AL121912.1-201ENST00000603683 238 ntBASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 AC023141.13-201ENST00000604991 943 ntBASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LRRTM1Q86UE6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 GRK6P1-201ENST00000400595 1711 ntBASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 AC098831.1-202ENST00000438821 336 ntBASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 AC073389.1-201ENST00000595595 795 ntBASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 AC007064.4-201ENST00000637740 555 ntBASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.73□□□□□ -0.21
LRRTM1Q86UE6 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LRRTM1Q86UE6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms