Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 AP002414.2-201ENST00000591780 3365 ntBASIC10.75□□□□□ -0.69
CSMD3Q7Z407 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC10.75□□□□□ -0.69
CSMD3Q7Z407 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 GHSR-202ENST00000427970 912 ntBASIC10.74□□□□□ -0.69
CSMD3Q7Z407 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 FOS-204ENST00000554617 796 ntTSL 2 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 CMC2-214ENST00000565925 640 ntTSL 5 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 AL805961.1-203ENST00000641078 1258 ntBASIC10.74□□□□□ -0.69
CSMD3Q7Z407 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 AC007274.2-201ENST00000421675 662 ntBASIC10.74□□□□□ -0.69
CSMD3Q7Z407 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 POU5F1P6-201ENST00000466990 990 ntBASIC10.74□□□□□ -0.69
CSMD3Q7Z407 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 AL162426.1-201ENST00000624141 743 ntBASIC10.74□□□□□ -0.69
CSMD3Q7Z407 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CSMD3Q7Z407 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 AC103988.2-201ENST00000561804 725 ntBASIC10.73□□□□□ -0.69
CSMD3Q7Z407 AC135983.4-201ENST00000564116 1262 ntBASIC10.73□□□□□ -0.69
CSMD3Q7Z407 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 AC005357.2-202ENST00000590507 1060 ntBASIC10.73□□□□□ -0.69
CSMD3Q7Z407 BX539320.1-201ENST00000623759 877 ntBASIC10.73□□□□□ -0.69
CSMD3Q7Z407 AC100757.4-201ENST00000626934 759 ntBASIC10.73□□□□□ -0.69
CSMD3Q7Z407 WT1-209ENST00000530998 2421 ntTSL 2 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 RN7SL8P-201ENST00000461771 266 ntBASIC10.73□□□□□ -0.69
CSMD3Q7Z407 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 AC138894.2-201ENST00000602838 371 ntBASIC10.73□□□□□ -0.69
CSMD3Q7Z407 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms