Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST2H3AQ71DI3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST2H3AQ71DI3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST2H3AQ71DI3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST2H3AQ71DI3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HIST2H3AQ71DI3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST2H3AQ71DI3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HIST2H3AQ71DI3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HIST2H3AQ71DI3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HIST2H3AQ71DI3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.9□□□□□ -0.19
HIST2H3AQ71DI3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 PPT1-215ENST00000641471 2368 ntBASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 HLA-J-203ENST00000494367 1087 ntBASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 MIR4453-201ENST00000584019 89 ntBASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HIST2H3AQ71DI3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 AC136621.1-201ENST00000624017 2304 ntBASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 AC013268.4-201ENST00000637413 2228 ntBASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HIST2H3AQ71DI3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms