Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 AC015911.4-201ENST00000588022 1070 ntBASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 AL450472.2-201ENST00000603663 1156 ntBASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.21□□□□□ -0.13
NHLRC1Q6VVB1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.21□□□□□ -0.14
NHLRC1Q6VVB1 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NHLRC1Q6VVB1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
NHLRC1Q6VVB1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
NHLRC1Q6VVB1 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
NHLRC1Q6VVB1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NHLRC1Q6VVB1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NHLRC1Q6VVB1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NHLRC1Q6VVB1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
NHLRC1Q6VVB1 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 AC136604.1-201ENST00000418535 575 ntBASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 SPDYE7P-202ENST00000420373 878 ntBASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 TSEN15P1-201ENST00000423257 515 ntBASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 HNRNPUP1-201ENST00000554987 333 ntBASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 AC138035.3-201ENST00000622706 2791 ntBASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NHLRC1Q6VVB1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 AC020658.6-201ENST00000623564 1870 ntBASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 TCAF2P1-201ENST00000291129 2421 ntBASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 AL079307.3-201ENST00000556114 283 ntBASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 AC079781.4-201ENST00000641908 219 ntBASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.19□□□□□ -0.14
NHLRC1Q6VVB1 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms