Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 AL513190.1-201ENST00000621254 727 ntBASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 BNIP3P1-202ENST00000550043 1585 ntBASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SMARCD3Q6STE5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMARCD3Q6STE5 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMARCD3Q6STE5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SMARCD3Q6STE5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SMARCD3Q6STE5 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
SMARCD3Q6STE5 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
SMARCD3Q6STE5 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
SMARCD3Q6STE5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.46□□□□□ -0.1
SMARCD3Q6STE5 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 AC009090.5-201ENST00000624886 2285 ntBASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 RNA5SP416-201ENST00000516838 111 ntBASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 REXO1L1P-202ENST00000608646 1974 ntBASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 FOXO1B-201ENST00000504678 1527 ntBASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.45□□□□□ -0.1
SMARCD3Q6STE5 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms