Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 ZBED1P1-201ENST00000502364 1930 ntBASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 IGLL3P-201ENST00000412472 434 ntBASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 UPK3BP1-201ENST00000428678 509 ntBASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 AC140658.5-201ENST00000438532 169 ntBASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 FAM197Y8-203ENST00000450145 560 ntBASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 AF186996.4-201ENST00000467186 377 ntBASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 CD63-210ENST00000550776 870 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 GOLGA2P9-201ENST00000596977 1937 ntBASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
LINC00242Q5T6M2 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AC004987.2-201ENST00000395959 1148 ntBASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 CRYGEP-201ENST00000412192 528 ntBASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 NMU-203ENST00000507338 658 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC10.81□□□□□ -0.68
LINC00242Q5T6M2 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms