Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 WASH6P-202ENST00000359512 1437 ntBASIC14.19□□□□□ -0.14
CCDC58Q4VC31 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 FAM210CP-201ENST00000445714 574 ntBASIC14.19□□□□□ -0.14
CCDC58Q4VC31 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 AC073648.2-201ENST00000510116 352 ntBASIC14.19□□□□□ -0.14
CCDC58Q4VC31 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 AC105339.3-201ENST00000560043 636 ntBASIC14.19□□□□□ -0.14
CCDC58Q4VC31 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCDC58Q4VC31 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 AL023775.1-201ENST00000454907 1746 ntBASIC14.18□□□□□ -0.14
CCDC58Q4VC31 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 AKR1C7P-201ENST00000305623 895 ntBASIC14.18□□□□□ -0.14
CCDC58Q4VC31 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 PRSS29P-201ENST00000440800 595 ntBASIC14.18□□□□□ -0.14
CCDC58Q4VC31 AF238378.1-201ENST00000526806 358 ntBASIC14.18□□□□□ -0.14
CCDC58Q4VC31 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 AC004790.2-201ENST00000623588 572 ntBASIC14.18□□□□□ -0.14
CCDC58Q4VC31 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 AL589702.1-201ENST00000641229 1509 ntBASIC14.18□□□□□ -0.14
CCDC58Q4VC31 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 AC112693.3-201ENST00000624819 1983 ntBASIC14.18□□□□□ -0.14
CCDC58Q4VC31 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCDC58Q4VC31 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms